@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu16100: (2016-06-25 )
MSVFINKDTRVIVQGITGSTALFHTKQMLEYGTNIVGGVTPGKGGTEAEGVPVFNTVAEAVQTTGANASVIYVPAPFAADAIMEAVDAELDLVICITEHIPVLDMVKVKRFMEGKKTRLIGPNCPGVITPEECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLSEAGVGQSTAVGIGGDPVNGTNFIDVLKAFNEDPDTHAVIMIGEIGGTAEEEAAEWVKANMTKPVVGFIGGKTAPPGKRMGHAGAIISGGKGTADEKIKTLNACGIEVAETPSVMGETLIKVLKEKNLFETCKTH

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

COA_A_11(2NU8)
SUCD_ECOLI
[Raw transfer]



COA_A_11(2NU8)
SUCD_ECOLI
[Raw transfer]



COA_A_12(2NUA)
SUCD_ECOLI
[Raw transfer]



COA_A_9(1CQJ)
SUCD_ECOLI
[Raw transfer]



COA_D_10(1CQJ)
SUCD_ECOLI
[Raw transfer]



COA_A_3(4XX0)
SUCA_PIG
[Raw transfer]



COA_W_23(1JLL)
SUCD_ECOLI
[Raw transfer]



COA_D_10(1CQI)
SUCD_ECOLI
[Raw transfer]



COA_G_7(2SCU)
SUCD_ECOLI
[Raw transfer]
23 PsiBlast_CBE 98.1364% 0 - C- -1JKJ - SUCD_ECOLI -
1 PsiBlast_PDB 98.1364% 0 - C- -1JKJ - SUCD_ECOLI -
10 PsiBlast_PDB 86.5161%-104 - C3 -1EUC - SUCA_PIG -
2 PsiBlast_PDB 85.9864%-105 - C3 -1JLL - SUCD_ECOLI -
9 PsiBlast_PDB 85.9761%-103 - C3 -2FPG - SUCA_PIG -
7 PsiBlast_PDB 85.8163%-104 - C3 -2NU8 8.5 SUCD_ECOLI
12 PsiBlast_PDB 85.7960%-124 - C3 -3UFX - SUCD_THETH -
3 PsiBlast_PDB 85.6263%-103 - C3 -2NU7 - SUCD_ECOLI -
22 PsiBlast_CBE 85.4564%-104 - C3 -1JLL 7.5 SUCD_ECOLI
11 PsiBlast_PDB 85.3061%-103 - C3 -4XX0 8.6 SUCA_PIG
28 PsiBlast_CBE 85.1863%-103 - C3 -2NU8 - SUCD_ECOLI -
13 PsiBlast_PDB 85.1160%-131 - C3 -1OI7 - SUCD_THETH -
6 PsiBlast_PDB 84.6863%-111 - C3 -2NUA 8.2 SUCD_ECOLI
29 HHSearch 84.6263%-107 - C3 -2NU8 8.5 SUCD_ECOLI
27 PsiBlast_CBE 84.5163%-110 - C3 -2NUA - SUCD_ECOLI -
24 PsiBlast_CBE 84.4763%-102 - C3 -2NU7 - SUCD_ECOLI -
21 PsiBlast_CBE 84.2064%-105 - C3 -1SCU - SUCD_ECOLI -
5 PsiBlast_PDB 83.9264%-104 - C3 -1CQJ 7.9 SUCD_ECOLI
34 HHSearch 83.5757%-133 - C3 -1OI7 - SUCD_THETH -
25 PsiBlast_CBE 83.5664%-104 - C3 -1CQJ 8.1 SUCD_ECOLI
26 PsiBlast_CBE 82.4364%-105 - C3 -1CQI 7.1 SUCD_ECOLI
52 Fugue 52.5260%-145 * C3 *2SCU 7.8 SUCD_ECOLI