@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu16430: (2016-06-25 )
MDMNQYLDVFIDESKEHLQTCNEKLLLLEKDPTDLQLVHDIFRAAHTLKGMSATMGYTDLAHLTHLLENVLDAIRNGDMEVTSDWLDILFEALDHLETMVQSIIDGGDGKRDISEVSAKLDVNGAHAESAASAEPAEAQSSASDWEYDEFERTVIQEAEEQGFKRYEIKISLNENCMLKAVRVYMVFEKLNEVGEVAKTIPSAEVLETEDFGTDFQVCFLTHQSAEDIEQLINGVSEIEHVEVIQGAPLTSAEKPEESKQEDSPAAAVPAKQEKQKQPAKNDEQAKHSAGGSKTIRVNIDRLDSLMNLFEELVIDRGRLEQIAKELEHNELTETVERMTRISGDLQSIILNMRMVPVETVFNRFPRMIRQLQKELNKKIELSIIGAETELDRTVIDEIGDPLVHLIRNSIDHGIEAPETRLQKGKPESGKVVLKAYHSGNHVFIEVEDDGAGLNRKKILEKALERGVITEKEAETLEDNQIYELIFAPGFSTADQISDISGRGVGLDVVKNKLESLGGSVSVKSAEGQGSLFSIQLPLTLSIISVLLIKLEEETFAIPISSIIETAVIDRKDILQTHDREVIDFRGHIVPVVYLKEEFKIEDTRKDAEQLHIIVVKKGDKPTAFVVDSFIGQQEVVLKSLGDYLTNVFAISGATILGDGEVALIIDCNALII

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ACP_A_6(1I58)
CHEA_THEMA
[Raw transfer]




ACP_A_6(1I58)
CHEA_THEMA
[Raw transfer]




ACP_A_6(1I58)
CHEA_THEMA
[Raw transfer]




ADP_C_3(1I5C)
CHEA_THEMA
[Raw transfer]




ADP_B_7(1I58)

[Raw transfer]




ACP_B_5(1I5A)

[Raw transfer]




ANP_A_5(2CH4)
CHEA_THEMA
[Raw transfer]




ANP_B_6(2CH4)

[Raw transfer]




ANP_A_5(2CH4)
CHEA_THEMA
[Raw transfer]




ANP_A_5(1I59)
CHEA_THEMA
[Raw transfer]




ACP_A_6(1I5A)
CHEA_THEMA
[Raw transfer]




ADP_B_6(1I59)

[Raw transfer]




ACP_A_3(4XIV)
CHEA_THEMA
[Raw transfer]




ACP_A_3(4XIV)
CHEA_THEMA
[Raw transfer]




ADP_B_4(4XIV)

[Raw transfer]




128_D_4(1I5D)

[Raw transfer]




2 PsiBlast_PDB 83.1447%-150 - C1 -3JA6 - CHEA_THEMA -
21 PsiBlast_CBE 77.7247%-144 - C1 -1B3Q - CHEA_THEMA -
38 HHSearch 76.9247%-143 - C1 -1B3Q - CHEA_THEMA -
1 PsiBlast_PDB 75.8047%-139 - C1 -1B3Q - CHEA_THEMA -
22 PsiBlast_CBE 72.0749%-147 - C1 -2CH4 5.3
29 Fugue 72.0248%-150 - C1 -2CH4 5.1 CHEA_THEMA
3 PsiBlast_PDB 70.6249%-148 - C1 -2CH4 5.1 CHEA_THEMA
28 Fugue 62.5851%-121 - C1 -4XIV 3.8 CHEA_THEMA
6 PsiBlast_PDB 62.3052%-121 - C1 -4XIV 3.8 CHEA_THEMA
23 PsiBlast_CBE 61.6252%-111 - C1 -4XIV 5.2
9 PsiBlast_PDB 59.7855%-121 - C1 -1I59 5.4 CHEA_THEMA
26 PsiBlast_CBE 58.6655%-118 - C1 -1I58 5.0
10 PsiBlast_PDB 58.5455%-111 - C1 -1I5A 5.9 CHEA_THEMA
11 PsiBlast_PDB 58.3255%-115 - C1 -1I5C 5.8 CHEA_THEMA
30 Fugue 57.3247%-168 - C1 -3UR1 - CHEA_THEMA -
24 PsiBlast_CBE 57.0555%-114 - C1 -1I5A 5.1
25 PsiBlast_CBE 57.0055% -95 - C1 -1I59 4.7
31 Fugue 56.8654%-104 - C1 -1I58 5.7 CHEA_THEMA
8 PsiBlast_PDB 56.8555%-106 - C1 -1I58 5.7 CHEA_THEMA
46 HHSearch 56.5955%-105 - C1 -1I58 5.7 CHEA_THEMA
7 PsiBlast_PDB 54.6354%-125 - C1 -1I5D 4.5