@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu16660: (2016-06-26 )
MVNGVLLLHKPVGMTSHDCVMKIRKLLKTKKVGHTGTLDPEVSGVLPICVGRATKIVEYLTEKSKTYDAEITLGFSTTTEDQTGETVETKPVNHDIDKADVEKVLNSLKGKQEQIPPMYSAVKVNGKKLYEYARAGIEVERPKRMITIEDIALTTEIKHHGETASFRFTVTCSKGTYVRTLAVMIGEKLGYPAHMSHLIRTASGDFSLDECFTFDELEAQAQSGTVEEHTVPIERALNHLPKWIISDTLAKKVENGALLETPEQFSEMTSGDRIAVFTESGTCLAIYFPHPAKKGLLKPAKVLMQKSEQ

Atome Classification :

(26 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

URA_A_2(1KSK)
RSUA_ECOLI
[Raw transfer]




BU1_A_4(1VIO)
RSUA_HAEIN
[Raw transfer]




NACID_E_5(3LWO)
TRUB_PYRFU
[Raw transfer]

-

NACID_F_6(3HAY)
TRUB_PYRFU
[Raw transfer]

-

CHAIN_E_5(3LWP)
TRUB_PYRFU
[Raw transfer]

-

NACID_C_1(1R3E)
TRUB_THEMA
[Raw transfer]

-

NACID_C_1(1R3E)
TRUB_THEMA
[Raw transfer]

-

NACID_C_1(1R3E)
TRUB_THEMA
[Raw transfer]

-

NACID_F_5(3HAX)
TRUB_PYRFU
[Raw transfer]

-

NACID_B_1(2AB4)
TRUB_THEMA
[Raw transfer]

-

NACID_B_1(1K8W)
TRUB_ECOLI
[Raw transfer]

-

NACID_B_1(1K8W)
TRUB_ECOLI
[Raw transfer]

-

NACID_C_1(1ZE2)
TRUB_THEMA
[Raw transfer]

-

NACID_B_1(1K8W)
TRUB_ECOLI
[Raw transfer]

-

NACID_E_5(3LWV)
TRUB_PYRFU
[Raw transfer]

-

CHAIN_E_5(3LWQ)
TRUB_PYRFU
[Raw transfer]

-

NACID_B_1(1ZL3)
TRUB_ECOLI
[Raw transfer]

-

NACID_E_5(3HJY)
TRUB_PYRFU
[Raw transfer]

-

NACID_E_5(3LWR)
TRUB_PYRFU
[Raw transfer]

-

NACID_E_5(3HJW)
TRUB_PYRFU
[Raw transfer]

-

49 Fugue 86.8834%-106 - C6 -1R3E 14.6 TRUB_THEMA
6 PsiBlast_PDB 85.7436%-102 - C6 -1R3E 14.6 TRUB_THEMA
7 PsiBlast_PDB 85.5136%-110 - C6 -2AB4 14.7 TRUB_THEMA
57 HHSearch 85.4333%-106 - C6 -1R3E 14.5 TRUB_THEMA
47 Fugue 84.6435% -95 - C6 -1K8W 10.3 TRUB_ECOLI
5 PsiBlast_PDB 84.5636%-108 - C6 -1ZE2 13.0 TRUB_THEMA
4 PsiBlast_PDB 84.3836%-102 - C6 -1ZE1 - TRUB_THEMA -
58 HHSearch 84.0634% -97 - C6 -1K8W 13.2 TRUB_ECOLI
23 PsiBlast_CBE 83.1836% -99 - C6 -1ZE1 - TRUB_THEMA -
22 PsiBlast_CBE 83.0236% -95 - C6 -1ZE1 - TRUB_THEMA -
9 PsiBlast_PDB 81.6232%-129 - C6 -2AUS - TRUB_PYRAB -
62 HHSearch 81.3936%-139 * C6 *2AUS - TRUB_PYRAB -
21 PsiBlast_CBE 81.1936%-105 - C6 -1ZE1 - TRUB_THEMA -
25 PsiBlast_CBE 79.2332%-134 - C6 -2AUS - TRUB_PYRAB -
15 PsiBlast_PDB 78.6232%-134 - C6 -3LWP 4.0 TRUB_PYRFU
2 PsiBlast_PDB 78.6041% -96 - C6 -1K8W 14.4 TRUB_ECOLI
61 HHSearch 78.5930%-126 - C6 -3U28 - CBF5_YEAST -
3 PsiBlast_PDB 77.5240% -95 - C6 -1ZL3 13.2 TRUB_ECOLI
14 PsiBlast_PDB 77.4832%-127 - C6 -3LWO 5.0 TRUB_PYRFU
17 PsiBlast_PDB 77.3732%-127 - C6 -3LWR 2.8 TRUB_PYRFU
18 PsiBlast_PDB 76.5432%-127 - C6 -3LWV 3.4 TRUB_PYRFU
16 PsiBlast_PDB 76.3432%-127 - C6 -3LWQ 4.4 TRUB_PYRFU
20 PsiBlast_PDB 76.1432%-131 - C6 -3HJY 3.4 TRUB_PYRFU
19 PsiBlast_PDB 75.0432%-121 - C6 -3HJW 10.4 TRUB_PYRFU
13 PsiBlast_PDB 74.9332%-124 - C6 -3HAY 7.9 TRUB_PYRFU
12 PsiBlast_PDB 74.7532%-122 - C6 -3HAX 9.8 TRUB_PYRFU