@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu17000: (2016-06-27 )
MNQWMELANRVLAGAEVTDEEALSILHCPDEDILLLMHGAFHIRKHFYGKKVKLNMIMNAKSGLCPENCGYCSQSAISKAPIESYRMVNKETLLEGAKRAHDLNIGTYCIVASGRGPSNREVDQVVDAVQEIKETYGLKVCACLGLLKPEQAKRLKDAGVDRYNHNLNTSQRNHSNITTSHTYDDRVNTVEIAKESGLSPCSGAIIGIKETKQDVIDIAKSLKALDADSIPVNFLHAIDGTPLEGVNELNPLYCLKVLALFRFINPSKEIRISGGREVNLRSLQPLGLYAANSIFVGDYLTTAGQEETEDHKMLSDLGFEVESVEEMKASLSAKS

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

SAM_B_4(1R30)
BIOB_ECOLI
[Raw transfer]




SAM_A_3(1R30)
BIOB_ECOLI
[Raw transfer]




SAM_A_3(1R30)
BIOB_ECOLI
[Raw transfer]




SAM_A_3(1R30)
BIOB_ECOLI
[Raw transfer]




DTB_A_9(1R30)
BIOB_ECOLI
[Raw transfer]




DTB_B_10(1R30)
BIOB_ECOLI
[Raw transfer]




SF4_A_5(1R30)
BIOB_ECOLI
[Raw transfer]




65 Fugue 79.3133% -82 - C2 -1R30 6.8 BIOB_ECOLI
42 HHSearch 78.8931% -82 - C2 -1R30 6.9 BIOB_ECOLI
21 PsiBlast_CBE 76.4535% -78 - C2 -1R30 6.8 BIOB_ECOLI
66 Fugue 75.9721% -93 - C2 -3T7V - PYLB_METBF -
41 HHSearch 75.9022% -97 * C2 *3T7V - PYLB_METBF -
1 PsiBlast_PDB 75.7935% -78 - C2 -1R30 6.8 BIOB_ECOLI
13 PsiBlast_PDB 66.9628% -88 - C2 -4JY8 - HYDE_THEMA -
2 PsiBlast_PDB 66.6323%-103 - C2 -3T7V - PYLB_METBF -
45 HHSearch 66.2817% -94 - C2 -4WCX - ? -
10 PsiBlast_PDB 65.4428% -82 - C2 -3CIX - HYDE_THEMA -
14 PsiBlast_PDB 65.3128% -81 - C2 -4JY9 - HYDE_THEMA -
11 PsiBlast_PDB 65.2128% -80 - C2 -4JXC - HYDE_THEMA -
15 PsiBlast_PDB 65.1128% -83 - C2 -5FF2 - ? -
4 PsiBlast_PDB 65.0028% -83 - C2 -5FES - ? -
6 PsiBlast_PDB 64.9528% -82 - C2 -5FEW - ? -
5 PsiBlast_PDB 64.9428% -82 - C2 -5FEX - ? -
12 PsiBlast_PDB 64.9228% -84 - C2 -5FF3 - ? -
8 PsiBlast_PDB 64.7728% -81 - C2 -5FF0 - ? -
9 PsiBlast_PDB 64.6828% -82 - C2 -5FF4 - ? -
7 PsiBlast_PDB 64.5728% -81 - C2 -5FEZ - ? -