@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu17040: (2016-06-27 )
MAGYTPMIQQYLKIKAEHQDAFLFFRLGDFYEMFFEDAKKASQELEITLTSRDGGAAEKIPMCGVPYHSASAYIEQLIKKGYKVAICEQTEDPKAAKGVVKREVVQLITPGTVMDGKGIHESENNFIASVSACSNGYGLALSDLTTGENLAVLIERLEDVISEIYSVGAREIVVSGSLDADTVAQLRERCGATISIEDGETDEHVTIIEHLNNEDITKTFLRLYTYLKRTQKRSLDHLQPVQVYELEEAMKIDLYSKRNLELTETIRSKNKKGSLLWLLDETKTAMGGRLLKQWIDRPLIRVNQIEERQEMVETLMSHFFEREDLRERLKEVYDLERLAGRVAFGNVNARDLIQLKESLKQVPGIKQLVASLAHDKAKERAKRIDPCGDVLELLEEALYENPPLSVKEGNLIKDGYNQKLDEYRDASRNGKDWIARLEQQEREYTGIRSLKVGFNKVFGYYIEVTKANLHLLEEGRYERKQTLTNAERYITPELKEKEALILEAENNICELEYELFTELREKVKQYIPRLQQLAKQMSELDALQCFATISENRHYTKPEFSKDEVEVIEGRHPVVEKVMDSQEYVPNNCMMGDNRQMLLITGPNMSGKSTYMRQIALISIMAQIGCFVPAKKAVLPIFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIVNATKNSLILFDEIGRGTSTYDGMALAQAIIEYVHDHIGAKTLFSTHYHELTVLEDKLPQLKNVHVRAEEYNGTVVFLHQIKEGAADKSYGIHVAQLAELPGDLIARAQDILKELEHSGNKPEVPVQKPQVKEEPAQLSFFDEAEKPAETPKLSKKEKQVIDAFKSLNILDMTPLEAMNEMYKLQKKLH

Atome Classification :

(28 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NACID_C_1(1NNE)
MUTS_THEAQ
[Raw transfer]

-

NACID_C_1(1EWQ)
MUTS_THEAQ
[Raw transfer]

-

NACID_C_1(1EWQ)
MUTS_THEAQ
[Raw transfer]

-

NACID_F_4(3K0S)
MUTS_ECOLI
[Raw transfer]

-

NACID_F_4(3K0S)
MUTS_ECOLI
[Raw transfer]

-

NACID_C_1(1FW6)
MUTS_THEAQ
[Raw transfer]

-

NACID_E_1(1WB9)
MUTS_ECOLI
[Raw transfer]

-

NACID_C_1(1NNE)
MUTS_THEAQ
[Raw transfer]

-

NACID_E_1(1WBD)
MUTS_ECOLI
[Raw transfer]

-

NACID_E_1(1WBB)
MUTS_ECOLI
[Raw transfer]

-

NACID_F_4(1E3M)
MUTS_ECOLI
[Raw transfer]

-

NACID_F_2(1OH5)
MUTS_ECOLI
[Raw transfer]

-

NACID_E_1(1WBB)
MUTS_ECOLI
[Raw transfer]

-

CHAIN_E_3(2WTU)
MUTS_ECOLI
[Raw transfer]

-

NACID_E_1(1WB9)
MUTS_ECOLI
[Raw transfer]

-

NACID_E_1(1W7A)
MUTS_ECOLI
[Raw transfer]

-

NACID_E_1(1OH8)
MUTS_ECOLI
[Raw transfer]

-

NACID_E_1(1OH6)
MUTS_ECOLI
[Raw transfer]

-

NACID_F_6(3ZLJ)
MUTS_ECOLI
[Raw transfer]

-

NACID_E_1(1OH7)
MUTS_ECOLI
[Raw transfer]

-

NACID_E_1(1WB9)
MUTS_ECOLI
[Raw transfer]

-

NACID_F_2(1OH7)
MUTS_ECOLI
[Raw transfer]

-

NACID_E_1(1WBD)
MUTS_ECOLI
[Raw transfer]

-

CHAIN_F_4(2WTU)
MUTS_ECOLI
[Raw transfer]

-

NACID_F_2(1OH5)
MUTS_ECOLI
[Raw transfer]

-

NACID_F_2(1OH8)
MUTS_ECOLI
[Raw transfer]

-

NACID_E_5(3ZLJ)
MUTS_ECOLI
[Raw transfer]

-

NACID_F_2(1OH6)
MUTS_ECOLI
[Raw transfer]

-

12 PsiBlast_PDB 86.7339%-100 - C4 -1NNE 5.9 MUTS_THEAQ
45 HHSearch 86.6240% -91 - C4 -1WB9 7.2 MUTS_ECOLI
2 PsiBlast_PDB 85.7040% -87 - C4 -1OH6 7.0 MUTS_ECOLI
11 PsiBlast_PDB 85.6439% -88 - C4 -1E3M 6.9 MUTS_ECOLI
3 PsiBlast_PDB 85.2640% -88 - C4 -1OH7 6.5 MUTS_ECOLI
9 PsiBlast_PDB 85.1540% -89 - C4 -1WBB 8.9 MUTS_ECOLI
10 PsiBlast_PDB 85.0340% -88 - C4 -1WB9 7.2 MUTS_ECOLI
8 PsiBlast_PDB 84.9440% -89 - C4 -3K0S 7.5 MUTS_ECOLI
5 PsiBlast_PDB 84.9240% -91 - C4 -2WTU 6.9 MUTS_ECOLI
7 PsiBlast_PDB 84.7640% -88 - C4 -1WBD 7.9 MUTS_ECOLI
6 PsiBlast_PDB 84.6840% -90 - C4 -3ZLJ 6.1 MUTS_ECOLI
14 PsiBlast_PDB 84.6738% -99 - C4 -1FW6 6.1 MUTS_THEAQ
13 PsiBlast_PDB 84.6638% -96 - C4 -1EWQ 6.6 MUTS_THEAQ
31 PsiBlast_CBE 84.5440% -93 - C4 -1WB9 2.1 MUTS_ECOLI
47 HHSearch 84.3140% -93 - C4 -1EWQ 6.7 MUTS_THEAQ
1 PsiBlast_PDB 84.2740% -87 - C4 -1OH5 5.2 MUTS_ECOLI
4 PsiBlast_PDB 84.2440% -84 - C4 -1OH8 7.8 MUTS_ECOLI
28 PsiBlast_CBE 83.9040% -90 - C4 -1WBD 3.3 MUTS_ECOLI
32 PsiBlast_CBE 83.7639% -96 - C4 -1NNE 4.0 MUTS_THEAQ
30 PsiBlast_CBE 83.6640% -92 - C4 -1WBB 4.0 MUTS_ECOLI
25 PsiBlast_CBE 83.3340% -92 - C4 -1OH7 1.2 MUTS_ECOLI
26 PsiBlast_CBE 83.2940% -93 - C4 -1OH6 3.8 MUTS_ECOLI
24 PsiBlast_CBE 83.0340% -94 - C4 -1OH8 3.2 MUTS_ECOLI
23 PsiBlast_CBE 82.8840% -89 - C4 -1W7A 2.7 MUTS_ECOLI
27 PsiBlast_CBE 82.6940% -93 - C4 -1OH5 4.0 MUTS_ECOLI
29 PsiBlast_CBE 81.7140% -90 - C4 -3K0S 3.9 MUTS_ECOLI
21 PsiBlast_CBE 81.2440% -89 - C4 -3ZLJ 1.8 MUTS_ECOLI
22 PsiBlast_CBE 79.8340% -88 - C4 -2WTU 1.4 MUTS_ECOLI