@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu17170: (2016-06-27 )
MTHSVVELIEIESAIIQVKMQDRTHKNAFSQELTDDLIQAFEYIRQNPKYKAVILTGYDNYFASGGTQEGLLRIQQGLTKFTDDNLYSLALDCEIPVIAAMQGHGIGGGFVMGLFADIVILSRESVYTANFMKYGFTPGMGATFIVPKKLGFSLAQEILLNAGSYRGADLEKRGVPFKVLPRAEVLDYAVELAQELAEKPRNSLVTLKDHLVAPLRDQLPRVIEQELMMHEKTFHHEEVKSRIKGLYGN

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GOL_C_9(4Q1I)
PKSI_BACSU
[Raw transfer]




EDO_A_5(4Q1J)
PKSI_BACSU
[Raw transfer]




EDO_B_6(4Q1G)
PKSI_BACSU
[Raw transfer]




GOL_C_13(4Q1H)
PKSI_BACSU
[Raw transfer]




GOL_C_9(4Q1K)
PKSI_BACSU
[Raw transfer]




GOL_A_5(4Q1K)
PKSI_BACSU
[Raw transfer]




GOL_C_13(4Q1H)
PKSI_BACSU
[Raw transfer]




GOL_C_9(4Q1K)
PKSI_BACSU
[Raw transfer]




GOL_A_3(2Q2X)
?
[Raw transfer]




EDO_A_5(4Q1J)
PKSI_BACSU
[Raw transfer]




EDO_A_4(4Q1G)
PKSI_BACSU
[Raw transfer]




EDO_B_6(4Q1G)
PKSI_BACSU
[Raw transfer]




27 PsiBlast_CBE 92.4999%-140 - C2 -4Q1I 3.0 PKSI_BACSU
2 PsiBlast_PDB 92.46100%-138 - C2 -4Q1H 3.0 PKSI_BACSU
26 PsiBlast_CBE 92.0499%-138 - C2 -4Q1K 3.0 PKSI_BACSU
25 PsiBlast_CBE 91.6599%-136 - C2 -4Q1K 3.1 PKSI_BACSU
24 PsiBlast_CBE 91.05100%-133 - C2 -4Q1G 3.0 PKSI_BACSU
5 PsiBlast_PDB 90.9699%-133 - C2 -4Q1J 3.0 PKSI_BACSU
28 PsiBlast_CBE 90.5199%-134 - C2 -4Q1J - PKSI_BACSU -
22 PsiBlast_CBE 89.93100%-132 - C2 -4Q1H - PKSI_BACSU -
4 PsiBlast_PDB 88.4299%-137 - C2 -4Q1K 3.0 PKSI_BACSU
29 PsiBlast_CBE 88.4199%-140 - C2 -4Q1J 3.0 PKSI_BACSU
21 PsiBlast_CBE 84.98100%-136 - C2 -4Q1H 2.0 PKSI_BACSU
3 PsiBlast_PDB 81.4899%-152 - C2 -4Q1I - PKSI_BACSU -
1 PsiBlast_PDB 77.74100%-133 - C2 -4Q1G 3.1 PKSI_BACSU
6 PsiBlast_PDB 74.2747%-143 - C2 -2Q35 - ? -
23 PsiBlast_CBE 74.26100%-136 - C2 -4Q1G 3.1 PKSI_BACSU
7 PsiBlast_PDB 74.2246%-140 - C2 -2Q2X 3.0 ?
8 PsiBlast_PDB 73.3146%-140 - C2 -2Q34 - ? -
10 PsiBlast_PDB 56.7224%-137 - C2 -4JCS - ? -
45 HHSearch 55.9322%-120 - C2 -3FDU - ? -
19 PsiBlast_PDB 55.3527%-168 - C2 -5E0N - ? -