@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu17370: (2016-06-27 )
MVQIIFDSKTGNVQRFVNKTGFQQIRKVDEMDHVDTPFVLVTYTTNFGQVPASTQSFLEKYAHLLLGVAASGNKVWGDNFAKSADTISRQYQVPILHKFELSGTSKDVELFTQEVERVVTKSSAKMDPVK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FMN_D_4(1RLJ)
NRDI_BACSU
[Raw transfer]




FMN_D_4(1RLJ)
NRDI_BACSU
[Raw transfer]




FMN_D_4(1RLJ)
NRDI_BACSU
[Raw transfer]




FMN_B_10(4BMO)
?
[Raw transfer]




FMN_A_2(2XOD)
?
[Raw transfer]




FMN_B_6(4BMP)
?
[Raw transfer]




FMN_A_2(2XOD)
?
[Raw transfer]




FMN_A_2(2X2O)
?
[Raw transfer]




FMN_A_2(2X2P)
?
[Raw transfer]




FMN_A_2(2XOE)
?
[Raw transfer]




44 Fugue 96.89100%-128 - C4 -1RLJ 9.9 NRDI_BACSU
1 PsiBlast_PDB 95.62100%-128 - C4 -1RLJ 9.9 NRDI_BACSU
24 HHSearch 93.4998%-124 - C4 -1RLJ 9.9 NRDI_BACSU
26 HHSearch 70.1148%-119 - C4 -2XOD 9.5 ?
2 PsiBlast_PDB 68.9449%-123 - C4 -2X2O 9.4 ?
7 PsiBlast_PDB 68.9148%-116 - C4 -2XOE 10.5 ?
6 PsiBlast_PDB 68.8048%-120 - C4 -2XOD 9.5 ?
3 PsiBlast_PDB 68.7949%-120 - C4 -2X2P 10.2 ?
4 PsiBlast_PDB 68.4649%-114 - C4 -4BMO 10.1 ?
25 HHSearch 68.0333%-153 - C4 -3N3A - NRDI_ECOLI -
5 PsiBlast_PDB 66.7049%-113 - C4 -4BMP 11.4 ?
45 Fugue 63.3322%-150 - C4 -4N82 - ? -
27 HHSearch 63.2222%-134 - C4 -4N82 - ? -
8 PsiBlast_PDB 61.6636%-136 - C4 -3N39 - NRDI_ECOLI -
22 PsiBlast_CBE 61.0436%-132 - C4 -3N3A - NRDI_ECOLI -
23 PsiBlast_CBE 60.4536%-132 - C4 -3N39 - NRDI_ECOLI -
10 PsiBlast_PDB 59.9136%-127 - C4 -3N3B - NRDI_ECOLI -
21 PsiBlast_CBE 59.3936%-129 - C4 -3N3B - NRDI_ECOLI -
9 PsiBlast_PDB 59.2436%-126 - C4 -3N3A - NRDI_ECOLI -
32 HHSearch 56.8520%-124 * C4 *2BMV - FLAV_HELPY -