@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu17520: (2016-06-28 )
MHITTKRLLIREFEFKDWQAVYEYTSDSNVMKYIPEGVFTEEDAKAFVNKNKGDNAEKFPVILRDEDCLIGHIVFYKYFGEHTYEIGWVFNPNYQNKGYASEAAQAILEYGFKEMNLHRIIATCQPENIPSYRVMKKIGMRREGFFKKCIPKGNEWWDEYYYAILEEEWN

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

COA_A_3(3FBU)
?
[Raw transfer]
22 HHSearch 95.0982%-158 - C1 -3FBU - ? -
1 PsiBlast_PDB 95.0982%-158 - C1 -3FBU - ? -
21 PsiBlast_CBE 94.5282%-148 - C1 -3FBU - ? -
43 Fugue 92.1081%-156 - C1 -3FBU 10.2 ?
11 PsiBlast_PDB 68.3425%-167 - C1 -4MHD - ATDA_VIBCH -
12 PsiBlast_PDB 68.1625%-168 - C1 -4MI4 - ATDA_VIBCH -
9 PsiBlast_PDB 67.5525%-155 - C1 -4R57 - ATDA_VIBCH -
51 Fugue 66.9523%-145 - C1 -4MHD - ATDA_VIBCH -
8 PsiBlast_PDB 66.6225%-168 - C1 -4MJ8 - ATDA_VIBCH -
32 HHSearch 66.1523%-143 - C1 -4MI4 - ATDA_VIBCH -
13 PsiBlast_PDB 65.5624%-152 - C1 -4NCZ - ATDA_VIBCH -
10 PsiBlast_PDB 65.4725%-161 - C1 -4R87 - ATDA_VIBCH -
7 PsiBlast_PDB 64.5125%-155 - C1 -4JLY - ATDA_VIBCH -
31 HHSearch 63.4721%-157 - C1 -2FCK - ? -
47 Fugue 62.7416%-117 - C1 -2ZW5 - ? -
50 Fugue 62.5524%-147 - C1 -4MI4 - ATDA_VIBCH -
6 PsiBlast_PDB 60.8425%-155 - C1 -4JJX - ATDA_VIBCH -
2 PsiBlast_PDB 59.3524%-160 - C1 -2FCK - ? -
26 HHSearch 56.6419%-136 - C1 -3PZJ - ? -
27 HHSearch 56.5021%-140 * C1 *3WR7 - ? -