@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu18100: (2016-06-28 )
MSQPELFHDLPLEEVIGDRFGRYSKYIIQDRALPDARDGLKPVQRRILYAMHTDGNTFDKNFRKAAKTVGNVIGNYHPHGDSSVYEAMVRMSQDWKVRNVLIEMHGNNGSIDGDPPAAMRYTEARLSPIASELLRDIDKNTVEFVPNFDDTSKEPVVLPAMFPNLLVNGSTGISAGYATDIPPHHLGEVIDAVIKRIQMPSCSVDELMEVIKGPDFPTGGIIQGVDGIRKAYETGKGKIIIRGKAEIETIRGGREQIVITEIPFEVNKANLVKKMDEFRIDKKVEGISEVRDETDRTGLRVVIELKKEADAKGILNFLYKNTDLQITYNFNMVAIHNRRPMLMSLPSILDAYIGHQKEVVTNRSVYELQKAKDRHHIVEGLMKALSILDEVIATIRSSSDKRDAKNNLIAKYEFTEPQAEAIVSLQLYRLTNTDITALKEEAEELGKKIEELESILSNDKKLLKVITNSLKALKKKYADTRRSVIEEKIEEIKINLEVMVASEDVYVTVTKDGYLKRTSQRSFAASNGQDFGMKDTDRMLHQFEMNTTDVLLLFTNKGSYIYCPVHQLPDIRWKDMGQHFSNLITIDRDETIVKAIPIKEFDPSAYLLFFTKNGMVKKTELTHYKAQRYSKALVALNLKGEDELIDVHVTNGESQIFMATHLGYGLWFGEDEVNVVGARAAGVKGINLKEDDFVVSGEILQQSDSIVLFTQRGAVKRMSLSEFEKTSRAKRGVVMLRELKKNPHRVVALFACGLEQRLMAETEKGDRKELQTKELRTNDRYSNGSFFFDEEESGKVTAVWRLHTEQ

Atome Classification :

(59 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NACID_E_5(3RAD)
PARC_STRPN
[Raw transfer]
-
CHAIN_H_8(4KPE)
PARC_STRPN
[Raw transfer]
-
CHAIN_H_8(4KOE)
PARC_STRPN
[Raw transfer]
-
NACID_H_8(3RAE)
PARC_STRPN
[Raw transfer]
-
NACID_H_8(3LTN)
PARC_STRPN
[Raw transfer]
-
NACID_H_8(3RAF)
PARC_STRPN
[Raw transfer]
-
GOL_A_4(3ILW)
GYRA_MYCTU
[Raw transfer]



SM8_A_5(2Y3P)
GYRA_ECOLI
[Raw transfer]



GOL_B_8(3ILW)
GYRA_MYCTU
[Raw transfer]



GOL_A_4(3ILW)
GYRA_MYCTU
[Raw transfer]



NACID_H_8(3RAD)
PARC_STRPN
[Raw transfer]
-
SM8_B_8(2Y3P)
GYRA_ECOLI
[Raw transfer]



NACID_H_8(3K9F)
PARC_STRPN
[Raw transfer]
-
NACID_H_8(5CDP)
GYRA_STAAN
[Raw transfer]
-
CHAIN_H_8(4KPF)
PARC_STRPN
[Raw transfer]
-
NACID_H_8(3KSA)
PARC_STRPN
[Raw transfer]
-
MPD_B_5(3IFZ)
GYRA_MYCTU
[Raw transfer]



MPD_A_3(3IFZ)
GYRA_MYCTU
[Raw transfer]



NACID_F_6(3RAF)
PARC_STRPN
[Raw transfer]
-
NACID_G_6(5CDP)
GYRA_STAAN
[Raw transfer]
-
NACID_F_6(3K9F)
PARC_STRPN
[Raw transfer]
-
NACID_F_6(3RAD)
PARC_STRPN
[Raw transfer]
-
NACID_G_6(5CDR)
GYRA_STAAN
[Raw transfer]
-
NACID_F_4(2XCR)
GYRA_STAAN
[Raw transfer]
-
NACID_E_3(2XCT)
GYRA_STAAN
[Raw transfer]
-
NACID_F_6(3LTN)
PARC_STRPN
[Raw transfer]
-
NACID_G_5(2XCT)
GYRA_STAAN
[Raw transfer]
-
NACID_F_4(2XCR)
GYRA_STAAN
[Raw transfer]
-
NACID_E_3(4BUL)
GYRA_STAAN
[Raw transfer]
-
NACID_X_11(2XCT)
GYRA_STAAN
[Raw transfer]
-
NACID_F_6(3KSA)
PARC_STRPN
[Raw transfer]
-
NACID_F_4(5BS3)
GYRA_STAAU
[Raw transfer]
-
NACID_F_4(5BS3)
GYRA_STAAU
[Raw transfer]
-
NACID_E_5(3KSB)
PARC_STRPN
[Raw transfer]
-
NACID_E_5(3KSB)
PARC_STRPN
[Raw transfer]
-
NACID_O_8(5CDN)
GYRA_STAAN
[Raw transfer]
-
NACID_F_7(5CDR)
GYRA_STAAN
[Raw transfer]
-
NACID_G_6(5CDN)
GYRA_STAAN
[Raw transfer]
-
NACID_W_8(2XCR)
GYRA_STAAN
[Raw transfer]
-
NACID_N_14(5CDN)
GYRA_STAAN
[Raw transfer]
-
NACID_P_16(5CDN)
GYRA_STAAN
[Raw transfer]
-
NACID_E_3(4BUL)
GYRA_STAAN
[Raw transfer]
-
NACID_W_8(2XCR)
GYRA_STAAN
[Raw transfer]
-
NACID_F_2(4PLB)
GYRA_STAAU
[Raw transfer]
-
NACID_F_2(4PLB)
GYRA_STAAU
[Raw transfer]
-
NACID_F_4(2XCS)
GYRA_STAAN
[Raw transfer]
-
NACID_F_4(2XCS)
GYRA_STAAN
[Raw transfer]
-
NACID_Y_12(2XCT)
GYRA_STAAN
[Raw transfer]
-
NACID_F_6(5CDQ)
GYRA_STAAN
[Raw transfer]
-
NACID_F_6(5CDQ)
GYRA_STAAN
[Raw transfer]
-
NACID_W_12(5CDQ)
GYRA_STAAN
[Raw transfer]
-
NACID_W_12(5CDQ)
GYRA_STAAN
[Raw transfer]
-
NACID_W_12(5CDO)
GYRA_STAAN
[Raw transfer]
-
NACID_F_6(5CDO)
GYRA_STAAN
[Raw transfer]
-
NACID_I_6(5CDM)
GYRA_STAAN
[Raw transfer]
-
NACID_W_12(5CDO)
GYRA_STAAN
[Raw transfer]
-
11 PsiBlast_PDB 95.9764% 0 - C- -4KPF - PARC_STRPN -
10 PsiBlast_PDB 95.9764% 0 - C- -4KPE - PARC_STRPN -
9 PsiBlast_PDB 95.9764% 0 - C- -4KOE - PARC_STRPN -
8 PsiBlast_PDB 95.9764% 0 - C- -3RAE - PARC_STRPN -
7 PsiBlast_PDB 85.3864% -67 - C5 -3RAD 4.7 PARC_STRPN
6 PsiBlast_PDB 85.2264% -67 - C5 -3RAF 4.6 PARC_STRPN
26 PsiBlast_CBE 84.9564% -69 - C5 -3RAD 2.6 PARC_STRPN
22 PsiBlast_CBE 84.9164% -65 - C5 -4KPE 3.0 PARC_STRPN
21 PsiBlast_CBE 84.7164% -71 - C5 -4KPF 4.3 PARC_STRPN
30 PsiBlast_CBE 84.6264% -69 - C5 -3K9F 4.3 PARC_STRPN
2 PsiBlast_PDB 84.6164% -69 - C5 -3K9F 4.3 PARC_STRPN
3 PsiBlast_PDB 84.5464% -76 - C5 -3KSA 4.7 PARC_STRPN
24 PsiBlast_CBE 84.4464% -69 - C5 -3RAF 4.3 PARC_STRPN
29 PsiBlast_CBE 84.3664% -77 - C5 -3KSA 4.3 PARC_STRPN
4 PsiBlast_PDB 84.0864% -80 - C5 -3KSB 4.3 PARC_STRPN
23 PsiBlast_CBE 84.0164% -67 - C5 -4KOE 4.7 PARC_STRPN
25 PsiBlast_CBE 83.9564% -68 - C5 -3RAE 3.1 PARC_STRPN
28 PsiBlast_CBE 83.9364% -80 - C5 -3KSB 3.1 PARC_STRPN
27 PsiBlast_CBE 83.6664% -71 - C5 -3LTN 3.6 PARC_STRPN
5 PsiBlast_PDB 83.5264% -71 - C5 -3LTN 4.0 PARC_STRPN
57 PsiBlast_CBE 78.9951% -24 - C5 -5CDN 3.6 GYRA_STAAN (first)
34 PsiBlast_CBE 78.1251% -20 - C5 -5CDP 2.6 GYRA_STAAN
33 PsiBlast_CBE 77.9151% -21 - C5 -5CDR 4.9 GYRA_STAAN
58 PsiBlast_CBE 77.8851% -22 - C5 -5CDN 4.2 GYRA_STAAN (first)
40 PsiBlast_CBE 77.7151% -22 - C5 -5BS3 6.1 GYRA_STAAU (first)
39 PsiBlast_CBE 77.7151% -19 - C5 -2XCS 5.5 GYRA_STAAN (first)
19 PsiBlast_PDB 77.7051% -24 - C5 -5BS3 3.1 GYRA_STAAU (first)
17 PsiBlast_PDB 77.7051% -22 - C5 -4BUL 5.5 GYRA_STAAN
41 PsiBlast_CBE 77.6851% -21 - C5 -4PLB 6.2 GYRA_STAAU (first)
18 PsiBlast_PDB 77.6751% -20 - C5 -4PLB 5.1 GYRA_STAAU (first)
54 PsiBlast_CBE 77.3951% -24 - C5 -5CDQ 4.0 GYRA_STAAN
13 PsiBlast_PDB 77.1351% -19 - C5 -5CDP 3.8 GYRA_STAAN
14 PsiBlast_PDB 77.0751% -20 - C5 -5CDR 3.4 GYRA_STAAN
15 PsiBlast_PDB 77.0251% -19 - C5 -2XCS 3.3 GYRA_STAAN (first)
53 PsiBlast_CBE 77.0151% -22 - C5 -5CDQ 1.9 GYRA_STAAN
35 PsiBlast_CBE 76.7451% -23 - C5 -4BUL 5.1 GYRA_STAAN
44 PsiBlast_CBE 76.1651% -22 - C5 -2XCR 4.9 GYRA_STAAN (first)
37 PsiBlast_CBE 75.8151% -20 - C5 -2XCT 2.8 GYRA_STAAN
42 PsiBlast_CBE 75.7251% -25 - C5 -2XCR 3.9 GYRA_STAAN (first)
38 PsiBlast_CBE 75.5751% -21 - C5 -2XCT 3.5 GYRA_STAAN
20 PsiBlast_PDB 75.3251% -22 - C5 -2XCR 4.2 GYRA_STAAN (first)
60 PsiBlast_CBE 75.0845% -33 - C5 -2Y3P 3.6 GYRA_ECOLI (first)
16 PsiBlast_PDB 75.0251% -20 - C5 -2XCT 4.5 GYRA_STAAN
43 PsiBlast_CBE 75.0151% -21 - C5 -2XCR 4.4 GYRA_STAAN (first)
36 PsiBlast_CBE 74.8651% -27 - C5 -2XCT 3.7 GYRA_STAAN
61 PsiBlast_CBE 73.9245% -34 - C5 -2Y3P 2.8 GYRA_ECOLI (first)
64 PsiBlast_CBE 71.2645% 15 - C5 -3ILW 2.2 GYRA_MYCTU
63 PsiBlast_CBE 71.2245% 14 - C5 -3IFZ 3.5 GYRA_MYCTU
65 PsiBlast_CBE 71.1145% 17 - C5 -3ILW 2.7 GYRA_MYCTU
103 HHSearch 71.0945% 16 * C5 *3ILW 2.7 GYRA_MYCTU
62 PsiBlast_CBE 70.6545% 18 - C5 -3IFZ 3.0 GYRA_MYCTU
55 PsiBlast_CBE 60.9351% 21 - C5 -5CDN Error GYRA_STAAN
51 PsiBlast_CBE 60.8951% 20 - C5 -5CDQ Error GYRA_STAAN
52 PsiBlast_CBE 60.8751% 17 - C5 -5CDQ 5.3 GYRA_STAAN
45 PsiBlast_CBE 60.8751% 17 - C5 -5CDO Error GYRA_STAAN
49 PsiBlast_CBE 60.1451% 23 - C5 -5CDM 0.1 GYRA_STAAN
47 PsiBlast_CBE 59.8951% 24 - C5 -5CDO 5.5 GYRA_STAAN
56 PsiBlast_CBE 59.6151% 19 - C5 -5CDN 1.3 GYRA_STAAN
46 PsiBlast_CBE 59.2151% 24 - C5 -5CDO 4.8 GYRA_STAAN