@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu18150: (2016-06-29 )
MMSSVKKTICVLLVCFTMMSVMLLGPGVTEVSAASDAKVNISADRQVIRGFGGMNHPAWIGDLTAAQRETAFGNGQNQLGFSVLRIHVDENRNNWYKEVETAKSAIKHGAIVFASPWNPPNDMVETFNHNGDTSAKRLRYDKYAAYAQHLNDFVNFMKSNGVNLYAISMQNEPDYAHEWTWWTPQEILRFMRENAGSINARVIAPESFQYLKNISDPILNDPQALRNMDILGTHLYGTQVSQFPYPLFKQKGGGKELWMTEVYYPNSDNNSADRWPEALGVSEHIHHSMVEGDFQAYVWWYIRRSYGPMKEDGMISKRGYNMAHFSKFVRPGYVRIDATKNPEPNVYVSAYKGDNKVVIVAINKNNTGVNQNFVLQNGTASQVSRWITSSSSNLQPGTDLKVTDNHFWAHLPAQSVTTFVVKR

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

EDO_A_11(2YIH)
?
[Raw transfer]



GLC_A_4(4UQC)
?
[Raw transfer]



HIS_A_2(4UQA)
?
[Raw transfer]



TRS_A_4(4UQD)
?
[Raw transfer]



GOL_A_3(4UQE)
?
[Raw transfer]



TRS_A_4(4UQD)
?
[Raw transfer]



GOL_A_2(4UQD)
?
[Raw transfer]



EPE_A_3(4UQB)
?
[Raw transfer]



TRS_A_4(4UQE)
?
[Raw transfer]



CHAIN_C_2(4CKQ)
?
[Raw transfer]
-
MLA_A_3(4CKQ)
?
[Raw transfer]



SUGAR_A_2(2Y24)
?
[Raw transfer]
-
SUGAR_A_2(2Y24)
?
[Raw transfer]
-
27 PsiBlast_CBE 98.1291% -77 - C2 -3KL0 - XYNC_BACSU -
2 PsiBlast_PDB 97.6191% -75 - C2 -3KL0 - XYNC_BACSU -
28 PsiBlast_CBE 97.4691% -73 - C2 -3KL0 - XYNC_BACSU -
26 PsiBlast_CBE 97.3791% -76 - C2 -3KL0 - XYNC_BACSU -
25 PsiBlast_CBE 97.2091% -78 - C2 -3KL3 - XYNC_BACSU -
3 PsiBlast_PDB 97.1991% -80 - C2 -3KL3 - XYNC_BACSU -
22 PsiBlast_CBE 96.8491% -74 - C2 -3KL5 - XYNC_BACSU -
23 PsiBlast_CBE 96.7991% -74 - C2 -3KL5 - XYNC_BACSU -
1 PsiBlast_PDB 96.6291% -70 - C2 -3GTN - XYNC_BACSU -
4 PsiBlast_PDB 96.5991% -76 - C2 -3KL5 - XYNC_BACSU -
21 PsiBlast_CBE 95.4891% -84 - C2 -3KL5 - XYNC_BACSU -
10 PsiBlast_PDB 88.0868% -61 - C2 -4UQD 2.5 ?
6 PsiBlast_PDB 88.0668% -61 - C2 -4CKQ 5.1 ?
9 PsiBlast_PDB 87.8368% -58 - C2 -4UQC 2.3 ?
11 PsiBlast_PDB 87.7368% -59 - C2 -4UQE 2.5 ?
39 HHSearch 87.7268% -61 - C2 -4UQD 2.4 ?
8 PsiBlast_PDB 87.6868% -61 - C2 -4UQB 3.2 ?
12 PsiBlast_PDB 87.4368% -60 - C2 -4UQA 2.6 ?
24 PsiBlast_CBE 87.2591% -78 - C2 -3KL3 - XYNC_BACSU -
5 PsiBlast_PDB 86.2778% -31 - C2 -4QAW - ? -
15 PsiBlast_PDB 67.1640% 5 - C2 -2Y24 6.2 ?
42 HHSearch 61.9539% 23 - C2 -2Y24 5.4 ?