@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu18490: (2016-06-30 )
MKEEKRSSTGFLVKQRAFLKLYMITMTEQERLYGLKLLEVLRSEFKEIGFKPNHTEVYRSLHELLDDGILKQIKVKKEGAKLQEVVLYQFKDYEAAKLYKKQLKVELDRCKKLIEKALSDNF

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NACID_E_2(2EFW)
RTP_BACSU
[Raw transfer]

-

NACID_E_2(2EFW)
RTP_BACSU
[Raw transfer]

-

NACID_E_3(2DPU)
RTP_BACSU
[Raw transfer]

-

NACID_J_4(2EFW)
RTP_BACSU
[Raw transfer]

-

NACID_D_1(1F4K)
RTP_BACSU
[Raw transfer]

-

NACID_D_1(2DPD)
RTP_BACSU
[Raw transfer]

-

NACID_J_4(2EFW)
RTP_BACSU
[Raw transfer]

-

NACID_D_1(1F4K)
RTP_BACSU
[Raw transfer]

-

NACID_D_1(2DPD)
RTP_BACSU
[Raw transfer]

-

2 PsiBlast_PDB 90.8599%-127 - C3 -1F4K 4.2 RTP_BACSU
25 PsiBlast_CBE 90.3299%-128 - C3 -1F4K 7.2 RTP_BACSU
24 PsiBlast_CBE 90.3199%-121 - C3 -2DPD 6.1 RTP_BACSU
6 PsiBlast_PDB 90.1599%-134 - C3 -2EFW 5.3 RTP_BACSU
4 PsiBlast_PDB 89.5299%-124 - C3 -2DPD 4.2 RTP_BACSU
3 PsiBlast_PDB 88.1999%-133 - C3 -1J0R - RTP_BACSU -
95 Fugue 87.73100%-107 - C3 -1BM9 - RTP_BACSU -
1 PsiBlast_PDB 87.73100%-107 - C3 -1BM9 - RTP_BACSU -
23 PsiBlast_CBE 87.2499%-136 - C3 -2EFW 3.8 RTP_BACSU
22 PsiBlast_CBE 87.0399%-137 - C3 -2EFW 5.3 RTP_BACSU
5 PsiBlast_PDB 86.8999%-120 - C3 -2DPU 5.1 RTP_BACSU
21 PsiBlast_CBE 84.1899%-137 - C3 -2EFW 2.1 RTP_BACSU
7 PsiBlast_PDB 83.5898%-129 - C3 -2DQR - RTP_BACSU -
105 HHSearch 74.6797% 13 - C3 -1BM9 - RTP_BACSU -
96 Fugue 56.5817%-115 - C3 -1XMA - ? -
118 HHSearch 56.0420%-120 - C3 -4EJO - ? -
111 HHSearch 55.5418%-142 - C3 -2ESH - ? -
119 HHSearch 51.2512%-121 - C3 -3HHH - ? -
120 HHSearch 49.7613%-117 - C- -3L7W - ? -
117 HHSearch 47.0812%-107 - C3 -4ESF - ? -