@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu18620: (2016-06-30 )
MGIINGKEFIDRLNKLENEIWYDGEKIKGNISEHPAFKGIIKTKSSLYELQTKDELIHEMTYCLPGDHNRIGLSYLQPKTKNDLKKRRTMIEHWARHTHGMMGRSPDYMNTVMMSFASSAELLKDKENCFPEHILDMYEQAAKHDLSFTHTFITPQVNRSQSYFGLSEKPISAKVIDRTEKGLMIHGARLLATQGGLTDEILVFSAPKFFFETDEAYAFSIPSNTKGVKFITRESFVLSDSSFNHPLSSRYEEMDSIVVFDHVLVPWNRVFFYDNVEAAKDFMTKSSFHAFTFHQVVIRQMIKIEFLLGVAQLLVDTINVSEYQHIQEKLSEIIVGLETIKALIDKSENDAQLDEFGYMRPCLIPLQVISTIIPKLYPRFTEIIQLIGASGMVTLPTENAFDSEIREDLDQYLQATNTNAEERVKIFRLAWDLTMSSFGTRQTHYERYFFGDPIRISSRLYTSYPKQEQLNMIKTFLHADTEH

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FAD_A_5(2YYM)
HPAB_THET8
[Raw transfer]




FAD_A_6(2YYI)
HPAB_THET8
[Raw transfer]




FAD_A_8(2YYJ)
HPAB_THET8
[Raw transfer]




FAD_A_5(2YYL)
HPAB_THET8
[Raw transfer]




6 PsiBlast_PDB 86.5441% -45 - C6 -2YYM 9.5 HPAB_THET8
5 PsiBlast_PDB 86.0241% -48 - C6 -2YYL 10.3 HPAB_THET8
3 PsiBlast_PDB 86.0241% -43 - C6 -2YYJ 11.2 HPAB_THET8
4 PsiBlast_PDB 85.8041% -50 - C6 -2YYK - HPAB_THET8 -
2 PsiBlast_PDB 85.1441% -43 - C6 -2YYI 10.9 HPAB_THET8
1 PsiBlast_PDB 84.9941% -44 - C6 -2YYG - HPAB_THET8 -
27 HHSearch 84.8142% -32 - C6 -2YYK - HPAB_THET8 -
29 HHSearch 74.7625% -32 - C6 -4OO2 - ? -
7 PsiBlast_PDB 71.1527% -18 - C6 -4OO2 - ? -
15 Fugue 65.4317% -24 - C6 -1U8V - HDVD_CLOAM -
25 HHSearch 65.3422% -28 - C6 -4G5E - ? -
28 HHSearch 65.0322% -15 - C6 -3HWC - TFTD_BURCE -
9 PsiBlast_PDB 64.5024% 3 - C6 -3HWC - TFTD_BURCE -
26 HHSearch 63.5719% 7 - C6 -1U8V - HDVD_CLOAM -
10 PsiBlast_PDB 62.8020% -6 - C6 -1U8V - HDVD_CLOAM -
8 PsiBlast_PDB 61.6627% -16 - C6 -4G5E - ? -
39 HHSearch 43.4916% -78 - C6 -3SWO - ? -
34 HHSearch 40.7612% -80 - C6 -2IX5 - ACOX4_ARATH -
30 HHSearch 40.2314% -44 - C6 -2WBI - ACD11_HUMAN -
44 HHSearch 40.0913% -52 - C6 -4U83 - ? -