@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu19020: (2016-06-30 )
MNDDMVKIIRNGLSASQHPKHILVIGAGMSGLVSASLLKNAGHRVTILEASGRAGGRVCTLRSPFSDDLYFNAGPMRIPNNHSLTLEYIKKFKLPTNVFINRTPMDIIYANGIKTRLQVFERAPGILRYPVAPNEQGKTSEELMLSLLQPILNFINQNPARNWRIVEEQYKNHSLSSFLNTYFSYGAIDMIGVLLDMEAYMGMSLVEVLRESIFFSSPAHFYEITGGMDLLPHAFLPQLKTNILYHQKMMKMSQGENRVTIHCQHQQTAEFTSFTADLAIVTIPFSTLRFVKVEPYHSFSYYKRRAIRELNYISATKIGIEFKSRFWEKAGQHGGKSITDLPIRFSYYPSRNIGANGHAVILASYTWADEALIWDSLSEGERIQYTLLNLSEIYGDIVWSEFVSGTSFSWSQYPYSAGGFTAFEPGQELELYPYIPVPEGRVHFAGEHASLTHAWMQGAIESGIRVAYEVNRLP

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FAD_I_9(1REO)
OXLA_GLOHA
[Raw transfer]



FAD_D_4(1TDN)
OXLA_GLOHA
[Raw transfer]



FAD_D_4(1TDK)
OXLA_GLOHA
[Raw transfer]



FAD_D_4(1TDO)
OXLA_GLOHA
[Raw transfer]



FAD_A_3(4E0V)
OXLA_BOTJR
[Raw transfer]



FAD_B_4(4E0V)
OXLA_BOTJR
[Raw transfer]



CIT_G_7(1REO)
OXLA_GLOHA
[Raw transfer]
22 PsiBlast_CBE 81.6336% -33 - C4 -3KVE - OXLA_VIPAA -
1 PsiBlast_PDB 80.6136% -32 * C4 *1REO 10.7 OXLA_GLOHA
23 PsiBlast_CBE 80.5236% -35 - C4 -3KVE - OXLA_VIPAA -
5 PsiBlast_PDB 80.2036% -35 - C4 -3KVE - OXLA_VIPAA -
3 PsiBlast_PDB 80.1736% -33 - C4 -1TDN 8.6 OXLA_GLOHA
2 PsiBlast_PDB 80.0336% -33 - C4 -1TDK 10.6 OXLA_GLOHA
21 PsiBlast_CBE 79.3436% -33 - C4 -3KVE - OXLA_VIPAA -
4 PsiBlast_PDB 79.2436% -31 - C4 -1TDO 10.6 OXLA_GLOHA
8 PsiBlast_PDB 77.9735% -36 - C4 -2IID - OXLA_CALRH -
25 PsiBlast_CBE 77.7935% -37 - C4 -2IID - OXLA_CALRH -
34 PsiBlast_CBE 77.5235% -34 - C4 -1F8R - OXLA_CALRH -
29 PsiBlast_CBE 77.4435% -33 - C4 -1F8S - OXLA_CALRH -
28 PsiBlast_CBE 77.4035% -35 - C4 -1F8S - OXLA_CALRH -
24 PsiBlast_CBE 77.3035% -36 - C4 -2IID - OXLA_CALRH -
26 PsiBlast_CBE 77.1635% -34 - C4 -2IID - OXLA_CALRH -
33 PsiBlast_CBE 77.1435% -33 - C4 -1F8S - OXLA_CALRH -
7 PsiBlast_PDB 77.0235% -33 - C4 -1F8S - OXLA_CALRH -
6 PsiBlast_PDB 76.9435% -34 - C4 -1F8R - OXLA_CALRH -
35 PsiBlast_CBE 76.9235% -33 - C4 -1F8R - OXLA_CALRH -
31 PsiBlast_CBE 76.8935% -33 - C4 -1F8S - OXLA_CALRH -
37 PsiBlast_CBE 75.5635% -34 - C4 -4E0V 7.6 OXLA_BOTJR
9 PsiBlast_PDB 73.8735% -29 - C4 -4E0V 6.9 OXLA_BOTJR