@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu19190: (2016-07-01 )
MIKNHFTFQKLNGITPYIWTIFFILPFYFIWKSSSTFVIIVGIILTLLFFSVYRFAFVSKGWTIYLWGFLLIGISTASITLFSYIYFAFFIAYFIGNIKERVPFHILYYVHLISAAVAANFSLVLKKEFFLTQIPFVVITLISAILLPFSIKSRKERERLEEKLEDANERIAELVKLEERQRIARDLHDTLGQKLSLIGLKSDLARKLIYKDPEQAARELKSVQQTARTSLNEVRKIVSSMKGIRLKDELINIKQILEAADIMFIYEEEKWPENISLLNENILSMCLKEAVTNVVKHSQAKTCRVDIQQLWKEVVITVSDDGTFKGEENSFSKGHGLLGMRERLEFANGSLHIDTENGTKLTMAIPNNSK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ACP_A_3(3EHJ)
DESK_BACSU
[Raw transfer]



ATP_A_2(3EHG)

[Raw transfer]



ADP_A_3(3EHH)
DESK_BACSU
[Raw transfer]



ACP_A_3(3GIG)
DESK_BACSU
[Raw transfer]



ATP_A_2(3EHG)

[Raw transfer]



ADP_A_3(3EHH)
DESK_BACSU
[Raw transfer]



ATP_A_2(3EHG)

[Raw transfer]



ACP_A_5(3EHF)
DESK_BACSU
[Raw transfer]



ACP_B_5(3GIE)
DESK_BACSU
[Raw transfer]



ADP_A_3(3GIF)
DESK_BACSU
[Raw transfer]
14 PsiBlast_CBE 78.9999% -77 - C2 -3GIE 3.7 DESK_BACSU
4 PsiBlast_PDB 77.9596% -87 - C2 -3EHJ 6.7 DESK_BACSU
1 PsiBlast_PDB 77.9599% -96 - C2 -3GIG 4.0 DESK_BACSU
2 PsiBlast_PDB 75.3599% -95 - C2 -3GIF 4.7 DESK_BACSU
3 PsiBlast_PDB 74.5196% -90 - C2 -3EHH 6.8 DESK_BACSU
24 HHSearch 74.0798% -69 - C2 -3EHH 6.8 DESK_BACSU
5 PsiBlast_PDB 68.5297% -87 - C2 -3EHF 6.2 DESK_BACSU
15 Fugue 64.98100%-132 - C2 -3EHG 8.7
6 PsiBlast_PDB 64.98100%-132 - C2 -3EHG 8.7
44 HHSearch 57.8998%-104 * C2 *3EHG 8.7
31 HHSearch 44.6716% 22 - C2 -4U7O - ? -
29 HHSearch 42.4418% 47 - C2 -4Q20 - DIVL_CAUCR -
27 HHSearch 42.2920% 42 - C2 -4BIX - CPXA_ECOLI -
30 HHSearch 41.2116% 12 - C2 -2C2A - ? -
7 PsiBlast_PDB 40.3224% -69 - C2 -4GT8 - -
35 HHSearch 39.2011% -5 - C2 -2Q8G - PDK1_HUMAN -
28 HHSearch 38.5315% -2 - C2 -4E01 - BCKD_RAT -
16 Fugue 38.0418% 25 - C2 -1ID0 - -
25 HHSearch 37.7917% -7 - C2 -3A0R - ? -
36 HHSearch 36.7915% 38 - C2 -4GCZ - FIXL_BRADU (first) -