@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu19350: (2016-07-01 )
MDIIRKISHFAGQTFGIWVIVFAVLGFSFPSLFTWISSYITIFLGIIMFGMGLTLQADDFKELVRKPWQVIIGVIAQYTIMPLVAFGLAFGLHLPAEIAVGVILVGCCPGGTASNVMTFLAKGNTALSVAVTTISTLLAPVVTPLLIMLFAKEWLPVSPGSLFISILQAVLFPIIAGLIVKMFFRKQVAKAVHALPLVSVIGIVAIVSAVVSGNRENLLQSGLLIFSVVILHNGIGYLLGFLCAKLLKMDYPSQKAIAIEVGMQNSGLGAALATAHFSPLSAVPSAIFSVWHNLSGSMLATYWSKKVKKKQAGSKSSNLSL

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PTY_A_11(3ZUY)
?
[Raw transfer]




PTY_A_11(3ZUX)
?
[Raw transfer]




PTY_A_11(3ZUX)
?
[Raw transfer]




PTY_A_12(3ZUY)
?
[Raw transfer]




PTY_A_12(3ZUY)
?
[Raw transfer]




LDA_A_13(3ZUX)
?
[Raw transfer]




MPG_B_6(4N7W)
?
[Raw transfer]




CIT_A_3(4N7W)
?
[Raw transfer]




CIT_B_5(4N7W)
?
[Raw transfer]




CIT_A_3(4N7W)
?
[Raw transfer]




LDA_A_7(3ZUX)
?
[Raw transfer]




12 HHSearch 84.7958%-167 - C5 -3ZUX 7.2 ?
22 Fugue 84.5957%-164 - C5 -3ZUY 0.8 ?
2 PsiBlast_PDB 82.3254%-167 - C5 -3ZUX 7.2 ?
1 PsiBlast_PDB 82.1754%-164 - C5 -3ZUY 6.7 ?
13 HHSearch 76.0244%-152 - C5 -4N7W 3.6 ?
3 PsiBlast_PDB 75.5845%-151 - C5 -4N7W 3.6 ?
11 PsiBlast_CBE 75.3545%-149 - C5 -4N7W 5.5 ?
4 PsiBlast_PDB 74.5145%-161 - C5 -4N7X - ? -
24 Fugue 56.6720% -64 * C4 *2CY7 - ATG4B_HUMAN -
26 Fugue 44.3820% -56 - C4 -4QCC - DGOA_ECOLI -
30 Fugue 42.7613% -68 - C1 -4PW8 - T23O_HUMAN -
31 Fugue 40.9711% -49 - C- -3PT5 - ? -
29 Fugue 34.168% -70 - C2 -3BG1 - NU145_YEAST -
27 Fugue 33.8619% -53 - C3 -4OL8 - YG31B_YEAST -
21 HHSearch 32.6133%-371 - C5 -2KV5 - ? -
16 HHSearch 30.1516%-209 - C5 -4CZ8 - ? -
6 PsiBlast_PDB 29.1240%-101 - C5 -3DXX - TRMB_ECOLI -
8 PsiBlast_PDB 28.4840%-101 - C5 -3DXZ - TRMB_ECOLI -
7 PsiBlast_PDB 28.4740%-102 - C5 -3DXY - TRMB_ECOLI -
15 HHSearch 25.5614%-112 - C5 -5BZ3 - ? -