@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu19550: (2016-07-01 )
MTNTLDVLKARASVKEYDTNAPISKEELTELLDLATKAPSAWNLQHWHFTVFHSDESKAELLPVAYNQKQIVESSAVVAILGDLKANENGEEVYAELASQGYITDEIKQTLLGQINGAYQSEQFARDSAFLNASLAAMQLMIAAKAKGYDTCAIGGFNKEQFQKQFDISERYVPVMLISIGKAVKPAHQSNRLPLSKVSTWL

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FMN_B_6(3BEM)
MHQN_BACSU
[Raw transfer]




FMN_B_4(3GE6)
?
[Raw transfer]




FMN_B_6(3BEM)
MHQN_BACSU
[Raw transfer]




FMN_B_4(3GE6)
?
[Raw transfer]




FMN_A_5(4QLY)
?
[Raw transfer]




FMN_B_8(3GBH)
?
[Raw transfer]




FMN_B_8(3GBH)
?
[Raw transfer]




FMN_D_8(4QLY)
?
[Raw transfer]




FMN_C_7(4QLY)
?
[Raw transfer]




65 HHSearch 79.6144% -36 - C2 -3GE6 3.4 ?
71 HHSearch 77.7842% -32 - C2 -3GBH 3.3 ?
1 PsiBlast_PDB 77.2741% -36 - C2 -3GE6 3.4 ?
70 HHSearch 77.0032% -71 - C2 -3BEM 3.4 MHQN_BACSU
2 PsiBlast_PDB 74.9742% -9 - C2 -3GBH 3.3 ?
5 PsiBlast_PDB 73.8933% -89 - C2 -3BEM 3.4 MHQN_BACSU
3 PsiBlast_PDB 71.7235% -32 - C2 -4QLX - ? -
76 HHSearch 71.4633% -14 - C2 -4QLX - ? -
24 PsiBlast_CBE 71.2535% -26 - C2 -4QLX - ? -
21 PsiBlast_CBE 68.9735% -27 - C2 -4QLY 3.8 ?
22 PsiBlast_CBE 68.7235% -29 - C2 -4QLY 2.9 ?
67 HHSearch 68.2424% -65 - C2 -3GAG - ? -
23 PsiBlast_CBE 67.4435% -32 - C2 -4QLY 3.5 ?
4 PsiBlast_PDB 67.3435% -31 - C2 -4QLY - ? -
9 PsiBlast_PDB 66.6124% -37 - C2 -3GAG - ? -
69 HHSearch 66.5025% -87 - C2 -1NOX - NOX_THET8 -
10 PsiBlast_PDB 64.9923% -98 - C2 -3GE5 - ? -
63 HHSearch 64.0221% -95 - C2 -3EOF - ? -
60 HHSearch 61.7619% -88 - C2 -1ZCH - NFRA2_BACSU -
6 PsiBlast_PDB 61.4627% -4 - C2 -2B67 - ? -