@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu21680: (2016-07-03 )
MAYNKEEKIKSLNRMQYEVTQNNGTEPPFQNEYWDHKEEGLYVDIVSGKPLFTSKDKFDSQCGWPSFTKPIEEEVEEKLDTSHGMIRTEVRSRTADSHLGHVFNDGPGPNGLRYCINSAALRFVPKHKLKEEGYESYLHLFNK

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

RSM_A_4(3HCI)
?
[Raw transfer]



ACY_A_5(3CEZ)
MSRB_BURP1
[Raw transfer]



ACY_B_6(3CEZ)
MSRB_BURP1
[Raw transfer]



P6G_A_6(3HCH)
MSRAB_NEIMA
[Raw transfer]



CHAIN_G_7(3E0M)
MSAB1_STRPN
[Raw transfer]
-
CHAIN_E_5(3E0M)
MSAB1_STRPN
[Raw transfer]
-
CHAIN_E_5(3E0M)
MSAB1_STRPN
[Raw transfer]
-
P6G_B_12(3HCH)

[Raw transfer]



CHAIN_F_6(3E0M)
MSAB1_STRPN
[Raw transfer]
-
38 HHSearch 91.08100% -40 - C2 -3E0O - MSRB_BACSU -
1 PsiBlast_PDB 91.08100% -40 - C2 -3E0O - MSRB_BACSU -
2 PsiBlast_PDB 83.11100% -12 - C2 -2KZN - MSRB_BACSU -
44 HHSearch 74.7853% 5 - C2 -3E0M 5.5 MSAB1_STRPN
25 PsiBlast_CBE 74.3853% -16 - C2 -3CEZ 2.4 MSRB_BURP1
22 PsiBlast_CBE 74.1955% 1 - C2 -3E0M 3.9 MSAB1_STRPN
4 PsiBlast_PDB 73.5856% -14 - C2 -1L1D - MSRAB_NEIGO -
11 PsiBlast_PDB 73.5045% -48 - C2 -3HCI 3.3 ?
39 HHSearch 73.3052% 2 - C2 -3HCG - MSRAB_NEIMA -
24 PsiBlast_CBE 73.2653% -10 - C2 -3CXK - MSRB_BURP1 -
3 PsiBlast_PDB 73.0855% 2 - C2 -3E0M 5.5 MSAB1_STRPN
7 PsiBlast_PDB 72.6553% -19 - C2 -3CEZ 3.8 MSRB_BURP1
27 PsiBlast_CBE 72.1845% -45 - C2 -3HCI - ? -
8 PsiBlast_PDB 71.8453% -13 - C2 -3CXK - MSRB_BURP1 -
42 HHSearch 71.8152% -14 - C2 -3CXK - MSRB_BURP1 -
43 HHSearch 71.4244% -31 - C2 -3HCJ - ? -
5 PsiBlast_PDB 71.3055% -13 - C2 -3HCG - MSRAB_NEIMA -
10 PsiBlast_PDB 70.6346% -51 - C2 -3HCJ - ? -
21 PsiBlast_CBE 69.9955% 17 - C2 -3E0M 4.8 MSAB1_STRPN
6 PsiBlast_PDB 69.8155% -6 - C2 -3HCH 3.9 MSRAB_NEIMA
23 PsiBlast_CBE 68.0755% 1 - C2 -3HCH 2.5