@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu22360: (2016-07-04 )
MKTTINQVYKHVGEEVTIGAWVANKRSSGKIAFLQLRDGTGFIQGVVVKAEVEESIFQTAKSVTQETSLYIKGIVKEDERSPLGYELAVTDIEVIHEATDYPITPKEHGTEFLMDHRHLWLRSKRQHAIMKIRNEIIRATYEFFNNEGFVKVDPPILTGSAPEGTTELFATKYFDEDAYLSQSGQLYMEAAAMALGKVFSFGPTFRAEKSKTKRHLIEFWMIEPEMAFVEFEENLQVQENYVSFIVQSVLKNCKIELNTLGRDTSKLEQIKAPFPRITYDEAIEFLKEKGFDDIEWGDDFGAPHETAIAEHYDKPVFITRYPTSLKPFYMQPASDREDVVLCADLIAPEGYGEIIGGSERIHDMELLESRLKEHGLDSDAYKWYAELRKYGSVPHSGFGLGLERTVAWISGAPHVRETIPFPRLLNRLYP

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NSS_A_5(1X55)
SYN_PYRHO
[Raw transfer]




4AD_A_3(1X54)
SYN_PYRHO
[Raw transfer]




4AD_A_3(1X54)
SYN_PYRHO
[Raw transfer]




AMO_A_3(3NEM)
SYD_THEKO
[Raw transfer]




NSS_A_4(2XGT)
?
[Raw transfer]




NB8_A_3(2XTI)
?
[Raw transfer]




NSS_A_4(2XGT)
?
[Raw transfer]




ATP_B_8(2XTI)
?
[Raw transfer]




ATP_B_4(3NEM)
SYD_THEKO
[Raw transfer]




ATP_B_10(1B8A)
SYD_THEKO
[Raw transfer]




ASP_A_3(3NEL)
SYD_THEKO
[Raw transfer]




EPE_A_7(1WYD)
SYDND_SULTO
[Raw transfer]




EPE_B_8(1WYD)
SYDND_SULTO
[Raw transfer]




39 HHSearch 85.5446% 4 - C7 -1X54 8.2 SYN_PYRHO
1 PsiBlast_PDB 85.1646% 4 - C7 -1X54 8.2 SYN_PYRHO
2 PsiBlast_PDB 84.4346% 4 - C7 -1X55 7.9 SYN_PYRHO
3 PsiBlast_PDB 82.4946% -5 - C7 -1X56 - SYN_PYRHO -
27 PsiBlast_CBE 77.0533% -18 - C7 -2XTI 6.4 ?
12 PsiBlast_PDB 75.4933% -4 - C7 -2XTI 8.3 ?
5 PsiBlast_PDB 75.4733% -2 - C7 -3M4Q - ? -
6 PsiBlast_PDB 74.2335% 13 - C7 -3NEL 2.7 SYD_THEKO
23 PsiBlast_CBE 74.1533% 14 - C7 -3M4P - ? -
21 PsiBlast_CBE 73.7133% 14 - C7 -3M4P - ? -
8 PsiBlast_PDB 73.5635% 10 - C7 -3NEN - SYD_THEKO -
11 PsiBlast_PDB 73.3833% -17 - C7 -2XGT 7.5 ?
9 PsiBlast_PDB 73.1535% 15 - C7 -1B8A - SYD_THEKO -
24 PsiBlast_CBE 73.0335% 13 - C7 -3NEM 5.9 SYD_THEKO
4 PsiBlast_PDB 72.8833% 13 - C7 -3M4P - ? -
7 PsiBlast_PDB 72.8335% 14 - C7 -3NEM 6.4 SYD_THEKO
44 HHSearch 72.7834% 20 - C7 -3NEM - SYD_THEKO -
22 PsiBlast_CBE 72.7233% 4 - C7 -3M4P - ? -
25 PsiBlast_CBE 72.2435% 14 - C7 -1B8A 7.3 SYD_THEKO
43 HHSearch 72.0836% -7 - C7 -3I7F - ? -
10 PsiBlast_PDB 71.1635% 7 - C7 -1WYD 2.3 SYDND_SULTO
46 HHSearch 71.1234% 11 - C7 -2XGT 7.9 ?
26 PsiBlast_CBE 70.7935% 8 - C7 -1WYD 2.3 SYDND_SULTO