@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu22410: (2016-07-04 )
MYRTMMSGKLHRATVTEANLNYVGSITIDEDLIDAVGMLPNEKVQIVNNNNGARLETYIIPGKRGSGVICLNGAAARLVQEGDKVIIISYKMMSDQEAASHEPKVAVLNDQNKIEQMLGNEPARTIL

Atome Classification :

(30 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NSN_A_9(1UHE)
?
[Raw transfer]



FMR_B_4(2EEO)
?
[Raw transfer]



PEG_B_4(3PLX)
PAND_CAMJE
[Raw transfer]



NSN_A_9(1UHE)
?
[Raw transfer]



GOL_C_14(3OUG)
PAND_FRATT
[Raw transfer]



NSN_A_9(1UHE)
?
[Raw transfer]



NSN_A_9(1UHE)
?
[Raw transfer]



FMR_B_4(2EEO)
?
[Raw transfer]



CHAIN_D_3(1AW8)
?
[Raw transfer]
-
CHAIN_D_3(4AOK)
?
[Raw transfer]
-
CHAIN_C_3(3TM7)
?
[Raw transfer]
-
CHAIN_A_1(3PLX)
?
[Raw transfer]
-
CHAIN_A_1(3PLX)
?
[Raw transfer]
-
CHAIN_C_3(1PYU)
PAND_ECOLI
[Raw transfer]
-
23 PsiBlast_CBE 85.4547%-126 - C3 -1PT1 - PAND_ECOLI -
21 PsiBlast_CBE 85.3447%-122 - C3 -4AZD - ? -
7 PsiBlast_PDB 84.8247%-127 - C3 -1PT1 - PAND_ECOLI -
4 PsiBlast_PDB 84.5447%-124 - C3 -4AZD - ? -
5 PsiBlast_PDB 83.9647%-127 - C3 -4CRZ - ? -
3 PsiBlast_PDB 83.6347%-124 - C3 -4CS0 - PAND_ECOLI -
1 PsiBlast_PDB 82.8354%-109 - C3 -2C45 - PAND_MYCTU -
50 HHSearch 82.0552%-109 - C3 -2C45 - PAND_MYCTU -
2 PsiBlast_PDB 82.0347%-126 - C- -1PQE - PAND_ECOLI -
6 PsiBlast_PDB 81.8847% -22 - C3 -1PYQ - PAND_ECOLI -
22 PsiBlast_CBE 81.7947% -16 - C3 -1PYQ - PAND_ECOLI -
8 PsiBlast_PDB 80.2247% -15 - C3 -1PT0 - PAND_ECOLI -
12 PsiBlast_PDB 77.1646%-123 - C3 -3OUG - PAND_FRATT -
51 HHSearch 76.1044%-119 * C3 *3OUG Error PAND_FRATT
16 PsiBlast_PDB 74.9843%-151 - C3 -3TM7 3.3 ?
27 PsiBlast_CBE 72.3743%-158 - C3 -3TM7 - ? -
15 PsiBlast_PDB 71.7143%-158 - C3 -4CRY - ? -
13 PsiBlast_PDB 70.9544%-133 - C3 -4AOK 3.4 ?
19 PsiBlast_PDB 70.3543%-135 - C3 -4D7Z - ? -
10 PsiBlast_PDB 70.2750%-137 - C3 -2EEO 3.9 ?
14 PsiBlast_PDB 69.8744%-136 - C3 -1PYU 3.4 PAND_ECOLI
17 PsiBlast_PDB 69.6347%-141 - C3 -1UHE 3.5 ?
54 HHSearch 69.0946%-132 - C3 -1UHE 3.5 ?
53 HHSearch 45.8150% 44 - C3 -3PLX 7.2 ?
11 PsiBlast_PDB 44.5249% 43 - C3 -3PLX 6.8 ?
55 HHSearch 25.9958% -98 - C3 -1UHE Error ?
43 Fugue 25.9958% -98 - C3 -1UHE Error ?
40 Fugue 22.1760% 21 - C3 -2EEO Error ?
39 Fugue 19.0848% 90 - C3 -1AW8 Error ?
57 HHSearch 17.1054% 155 - C3 -3PLX Error PAND_CAMJE