@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu22450: (2016-07-04 )
MEKVFIKALPVLRILIEAGHQAYFVGGAVRDSYMKRTIGDVDIATDAAPDQVERLFQRTVDVGKEHGTIIVLWEDETYEVTTFRTESDYVDFRRPSEVQFISSLEEDLKRRDLTINAMAMTADGKVLDYFGGKKDIDQKVIRTVGKPEDRFQEDALRMLRAVRFMSQLGFTLSPETEEAIAKEKSLLSHVSVERKTIEFEKLLQGRASRQALQTLIQTRLYEELPGFYHKRENLISTSEFPFFSLTSREELWAALLINLGIVLKDAPLFLKAWKLPGKVIKEAIHIADTFGQSLDAMTMYRAGKKALLSAAKISQLRQNEKLDEKKLKDIQYAYQNLPIKSLKDLDITGKDLLALRNRPAGKWVSEELQWIEQAVVTGKLSNQKKHIEEWLKTCGQH

Atome Classification :

(31 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_7(1MIW)
CCA_GEOSE
[Raw transfer]




APC_F_6(1VFG)
?
[Raw transfer]




CTP_B_8(1MIY)
CCA_GEOSE
[Raw transfer]




APC_E_5(1VFG)
?
[Raw transfer]




ATP_B_5(4WC0)
?
[Raw transfer]




ATP_A_3(4WC0)
?
[Raw transfer]




ATP_A_3(3AQN)
?
[Raw transfer]




CTP_A_3(4WC7)
?
[Raw transfer]




CTP_A_3(4WC5)
?
[Raw transfer]




CTP_A_3(4WC1)
?
[Raw transfer]




ATP_B_5(3AQN)
?
[Raw transfer]




ATP_A_3(4WC6)
?
[Raw transfer]




CTP_B_4(4WC1)
?
[Raw transfer]




ATP_A_3(4WC4)
?
[Raw transfer]




APC_A_3(4WC2)
?
[Raw transfer]




GOL_B_5(3AQL)
?
[Raw transfer]




GOL_A_4(3AQL)
?
[Raw transfer]




21 PsiBlast_CBE 94.4644% -72 - C4 -1MIY 4.7 CCA_GEOSE
1 PsiBlast_PDB 94.2844% -74 - C4 -1MIY - CCA_GEOSE -
2 PsiBlast_PDB 93.4944% -78 - C4 -1MIV - CCA_GEOSE -
3 PsiBlast_PDB 93.4644% -74 - C4 -1MIW - CCA_GEOSE -
30 HHSearch 91.7343% -71 - C4 -1MIW 5.3 CCA_GEOSE
35 HHSearch 68.3531% -61 - C4 -3AQL 1.9 ?
54 Fugue 65.5029% 37 - C4 -3AQL - ? -
6 PsiBlast_PDB 64.0338% -49 - C4 -3AQN 5.6 ?
24 PsiBlast_CBE 63.9838% -40 - C4 -3AQL 3.2 ?
32 HHSearch 63.8523% 18 - C4 -3H38 - ? -
5 PsiBlast_PDB 63.7538% -46 - C4 -3AQL - ? -
31 HHSearch 63.6126% 11 - C4 -4X4W - TRNT1_HUMAN -
4 PsiBlast_PDB 63.3738% -43 - C4 -3AQM - ? -
23 PsiBlast_CBE 63.0538% -39 - C4 -3AQN 4.2 ?
22 PsiBlast_CBE 62.6138% -40 - C4 -3AQM - ? -
7 PsiBlast_PDB 60.9538% -47 - C4 -3AQK - ? -
36 HHSearch 59.3421% 13 - C4 -3WFP - ? -
55 Fugue 58.6726% 42 - C4 -4X4W - TRNT1_HUMAN -
34 HHSearch 57.1920% 21 * C4 *3WFO - ? -
33 HHSearch 57.1426% 12 - C4 -4WBY - ? -
13 PsiBlast_PDB 48.7836% 2 - C4 -4WC1 4.3 ?
10 PsiBlast_PDB 48.7336% 10 - C4 -1VFG 4.8 ?
28 PsiBlast_CBE 48.2236% 11 - C4 -1VFG 4.5 ?
26 PsiBlast_CBE 48.1036% 3 - C4 -4WC1 3.7 ?
27 PsiBlast_CBE 47.9836% 10 - C4 -4WC0 4.7 ?
18 PsiBlast_PDB 47.7736% 13 - C4 -4WC6 4.6 ?
17 PsiBlast_PDB 47.7436% 17 - C4 -4WC5 4.8 ?
19 PsiBlast_PDB 47.5536% 19 - C4 -4WC7 4.9 ?
16 PsiBlast_PDB 47.4736% 14 - C4 -4WC4 4.5 ?
12 PsiBlast_PDB 46.9536% 10 - C4 -4WC0 4.6 ?
14 PsiBlast_PDB 46.6136% 22 - C4 -4WC2 4.5 ?