@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu22610: (2016-07-05 )
MNQMKDTILLAGLGLIGGSIALAIKKNHPGKRIIGIDISDEQAVAALKLGVIDDRADSFISGVKEAATVIIATPVEQTLVMLEELAHSGIEHELLITDVGSTKQKVVDYADQVLPSRYQFVGGHPMAGSHKSGVAAAKEFLFENAFYILTPGQKTDKQAVEQLKNLLKGTNAHFVEMSPEEHDGVTSVISHFPHIVAASLVHQTHHSENLYPLVKRFAAGGFRDITRIASSSPAMWRDILLHNKDKILDRFDEWIREIDKIRTYVEQEDAENLFRYFKTAKDYRDGLPLRQKGAIPAFYDLYVDVPDHPGVISEITAILAAERISITNIRIIETREDINGILRISFQSDDDRKRAEQCIEARAEYETFYAD

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAD_C_9(3GGG)
?
[Raw transfer]




NAI_B_7(3GGO)
?
[Raw transfer]




NAD_B_7(3GGG)
?
[Raw transfer]




NAD_B_7(3GGP)
?
[Raw transfer]




NAI_C_9(3GGO)
?
[Raw transfer]




NAD_C_10(3GGP)
?
[Raw transfer]




NAP_A_2(4WJI)
?
[Raw transfer]




NAP_A_2(4WJI)
?
[Raw transfer]




NAI_A_5(3GGO)
?
[Raw transfer]




NAD_A_2(3B1F)
?
[Raw transfer]




NAD_A_2(3B1F)
?
[Raw transfer]




ENO_B_6(3GGO)
?
[Raw transfer]




ENO_C_8(3GGO)
?
[Raw transfer]




2 PsiBlast_PDB 80.3441% -83 - C3 -3B1F 7.3 ?
1 PsiBlast_PDB 79.2841% -68 - C3 -3DZB - ? -
46 HHSearch 77.1641% -6 - C3 -3B1F 5.2 ?
6 PsiBlast_PDB 76.3534%-105 - C3 -4WJI 9.7 ?
27 PsiBlast_CBE 70.2935% 14 - C3 -3GGG 6.3 ?
5 PsiBlast_PDB 69.8035% 11 - C3 -3GGP - ? -
45 HHSearch 69.6434% 22 * C3 *4WJI 8.2 ?
22 PsiBlast_CBE 69.4235% 15 - C3 -3GGP 8.0 ?
4 PsiBlast_PDB 69.2435% 10 - C3 -3GGO 7.5 ?
23 PsiBlast_CBE 69.2035% 9 - C3 -3GGP 6.7 ?
21 PsiBlast_CBE 69.1335% 17 - C3 -3GGP - ? -
25 PsiBlast_CBE 68.9835% 16 - C3 -3GGO 8.3 ?
24 PsiBlast_CBE 68.9335% 12 - C3 -3GGO - ? -
29 PsiBlast_CBE 68.8635% 11 - C3 -3GGG - ? -
3 PsiBlast_PDB 68.6935% 14 - C3 -3GGG - ? -
47 HHSearch 68.4034% 15 - C3 -3GGO - ? -
26 PsiBlast_CBE 67.9735% 9 - C3 -3GGO 10.4 ?
44 HHSearch 67.6635% 24 - C3 -2G5C - ? -
28 PsiBlast_CBE 67.2935% 11 - C3 -3GGG 9.6 ?
7 PsiBlast_PDB 67.2934% 17 - C3 -2G5C - ? -