@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu22740: (2016-07-05 )
MLNIIRLLAESLPRISDGNENTDVWVNDMKFKMAYSFLNDDIDVIERELEQTVRSDYPLLSEAGLHLLQAGGKRIRPVFVLLSGMFGDYDINKIKYVAVTLEMIHMASLVHDDVIDDAELRRGKPTIKAKWDNRIAMYTGDYMLAGSLEMMTRINEPKAHRILSQTIVEVCLGEIEQIKDKYNMEQNLRTYLRRIKRKTALLIAVSCQLGAIASGADEKIHKALYWFGYYVGMSYQIIDDILDFTSTEEELGKPVGGDLLQGNVTLPVLYALKNPALKNQLKLINSETTQEQLEPIIEEIKKTDAIEASMAVSEMYLQKAFQKLNTLPRGRARSSLAAIAKYIGKRKF

Atome Classification :

(39 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

RIS_B_12(1RQJ)
ISPA_ECOLI
[Raw transfer]




RIS_A_10(1RQJ)
ISPA_ECOLI
[Raw transfer]




DST_D_11(3KRF)
?
[Raw transfer]




DST_D_6(3OAC)
?
[Raw transfer]




2DE_B_8(3AQC)
HEXB_MICLU
[Raw transfer]




2DE_D_13(3AQC)
HEXB_MICLU
[Raw transfer]




DST_D_11(3KRO)
?
[Raw transfer]




IPE_C_18(3Q1O)
?
[Raw transfer]




IPE_D_24(3Q1O)
?
[Raw transfer]




IPE_A_7(3Q1O)
?
[Raw transfer]




DST_D_11(3OAB)
?
[Raw transfer]




IPE_B_13(3Q1O)
?
[Raw transfer]




GOL_A_5(3Q2Q)
?
[Raw transfer]




GOL_A_2(3LK5)
?
[Raw transfer]




GPP_D_9(3KRP)
?
[Raw transfer]




DST_A_10(1RQI)
ISPA_ECOLI
[Raw transfer]




DST_B_9(1RQI)
ISPA_ECOLI
[Raw transfer]




DST_A_6(3OAB)
?
[Raw transfer]




PPV_A_5(3KRP)
?
[Raw transfer]




PPV_A_6(3KRO)
?
[Raw transfer]




IPE_A_3(3WJO)
?
[Raw transfer]




PPV_A_6(3KRF)
?
[Raw transfer]




IPE_D_7(3KRC)
?
[Raw transfer]




IPE_A_2(3Q2Q)
?
[Raw transfer]




IPE_A_4(3WJO)
?
[Raw transfer]




IPR_A_9(1RQJ)
ISPA_ECOLI
[Raw transfer]




IPR_B_11(1RQJ)
ISPA_ECOLI
[Raw transfer]




CIT_A_3(3PKO)
?
[Raw transfer]




POP_A_3(3OYR)
?
[Raw transfer]




22 PsiBlast_CBE 95.3741% -98 - C1 -3AQB - HEXB_MICLU -
21 PsiBlast_CBE 94.2441%-100 - C1 -3AQC 4.8 HEXB_MICLU
1 PsiBlast_PDB 93.8941% -93 * C1 *3AQB - HEXB_MICLU -
2 PsiBlast_PDB 93.4341% -94 - C1 -3AQC 4.5 HEXB_MICLU
89 Fugue 88.8741% -74 - C1 -3AQB - HEXB_MICLU -
65 HHSearch 86.5641% -60 - C1 -3AQB - HEXB_MICLU -
4 PsiBlast_PDB 83.0432%-113 - C1 -3WJO 3.6 ?
91 Fugue 82.1727%-129 - C1 -3OYR - ? -
23 PsiBlast_CBE 81.2632%-119 - C1 -3WJN - ? -
10 PsiBlast_PDB 78.6029%-110 - C1 -3OYR 3.5 ?
8 PsiBlast_PDB 75.0727% -95 - C1 -4JYX - ? -
63 HHSearch 74.9230% -65 - C1 -4LOB - ? -
3 PsiBlast_PDB 72.7932% -65 - C1 -4LOB - ? -
67 HHSearch 72.1028% -54 - C1 -3PKO - ? -
9 PsiBlast_PDB 71.8527% -94 - C1 -4JXY - ? -
62 HHSearch 70.8228% -73 - C1 -3OYR - ? -
6 PsiBlast_PDB 70.5234% -13 - C1 -3Q2Q 2.3 ?
69 HHSearch 69.3830% -3 - C1 -1WY0 - ? -
84 HHSearch 68.7129% -41 - C1 -3IPI - GFPS_METMA -
5 PsiBlast_PDB 68.5534% -21 - C- -3LMD - ? -
13 PsiBlast_PDB 65.6130% -25 - C1 -3PKO 3.6 ?
36 PsiBlast_CBE 51.3735% -19 - C1 -3Q1O 4.0 ?
34 PsiBlast_CBE 51.3135% -21 - C1 -3Q1O 3.8 ?
33 PsiBlast_CBE 51.1235% -21 - C1 -3Q1O 3.9 ?
35 PsiBlast_CBE 50.7535% -19 - C1 -3Q1O 3.9 ?
18 PsiBlast_PDB 48.7632% -2 - C1 -3KRF 3.2 ?
25 PsiBlast_CBE 48.4432% 16 - C1 -3OAC 3.2 ?
20 PsiBlast_PDB 48.1732% 1 - C1 -3KRP 3.4 ?
31 PsiBlast_CBE 47.7532% -8 - C1 -3KRC 2.5 ?
27 PsiBlast_CBE 47.7532% -2 - C1 -3OAB 2.2 ?
19 PsiBlast_PDB 47.3932% 1 - C1 -3KRO 2.9 ?
26 PsiBlast_CBE 47.1132% 22 - C1 -3OAB 3.1 ?
52 PsiBlast_CBE 46.9631% 8 - C1 -1RQI 3.3 ISPA_ECOLI
30 PsiBlast_CBE 46.8832% 16 - C1 -3KRF 3.6 ?
29 PsiBlast_CBE 46.5032% 19 - C1 -3KRO 3.6 ?
51 PsiBlast_CBE 46.4031% 5 - C1 -1RQI 3.1 ISPA_ECOLI
53 PsiBlast_CBE 45.4631% 9 - C1 -1RQJ 4.0 ISPA_ECOLI
54 PsiBlast_CBE 45.1231% 12 - C1 -1RQJ 4.1 ISPA_ECOLI
28 PsiBlast_CBE 44.4532% 16 - C1 -3KRP 3.6 ?