@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu23070: (2016-07-05 )
MFRVLVSDKMSNDGLQPLIESDFIEIVQKNVADAEDELHTFDALLVRSATKVTEDLFNKMTSLKIVGRAGVGVDNIDIDEATKHGVIVINAPNGNTISTAEHTFAMISSLMRHIPQANISVKSREWNRTAYVGSELYGKTLGIVGLGRIGSEIAQRARAFGMTVHVFDPFLTEERAKKIGVNSRTFEEVLESADIITVHTPLTKETKGLLNKETIAKTKKGVRLINCARGGIIDEAALLEALENGHVAGAALDVFEVEPPVDNKLVDHPLVIATPHLGASTKEAQLNVAAQVSEEVLQFAKGLPVMSAINLPAMTKDEFAKIKPYHQIAGKIGSLVSQCMKEPVQDVAIQYEGTIAKLETSFITKALLSGFLKPRVDSTVNEVNAGGVAKERGISFSEKISSSESGYDNCISVKVTGDRSTFTVTATYIPHFGERIVEINGFNIDFYPTGHLVYIQHQDTTGVIGRVGRILGDNDINIATMQVGRKEKGGEAIMMLSFDRHLEDKIVKELTNVPDIVSVKLIDLP

Atome Classification :

(25 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAD_A_5(2G76)
SERA_HUMAN
[Raw transfer]



NAD_A_5(2G76)
SERA_HUMAN
[Raw transfer]



NAD_B_6(2G76)
SERA_HUMAN
[Raw transfer]



NAD_C_3(1WWK)
?
[Raw transfer]



NAD_C_3(1WWK)
?
[Raw transfer]



NAD_D_4(1WWK)
?
[Raw transfer]



NAP_A_2(5AOV)
?
[Raw transfer]



GOL_A_8(3JTM)
FDH_ARATH
[Raw transfer]



HPV_B_6(3DDN)
SERA_MYCTU
[Raw transfer]
23 PsiBlast_CBE 72.0437% 2 - C1 -3DDN 2.5 SERA_MYCTU
2 PsiBlast_PDB 70.1537% 2 - C1 -3DC2 - SERA_MYCTU -
22 PsiBlast_CBE 70.0737% 3 - C1 -1YGY - SERA_MYCTU -
1 PsiBlast_PDB 70.0037% 5 - C1 -1YGY - SERA_MYCTU -
3 PsiBlast_PDB 69.8837% 5 - C1 -3DDN - SERA_MYCTU -
107 HHSearch 69.2136% -0 - C1 -1YGY - SERA_MYCTU -
127 Fugue 68.1336% 13 - C1 -1YGY - SERA_MYCTU -
21 PsiBlast_CBE 67.9637% 2 - C1 -3DC2 - SERA_MYCTU -
9 PsiBlast_PDB 66.3037%-105 - C1 -2EKL - ? -
65 PsiBlast_CBE 62.6333%-128 - C1 -4ZGS - ? -
63 PsiBlast_CBE 61.9533%-130 - C1 -4ZGS - ? -
67 PsiBlast_CBE 61.5933%-128 - C1 -4ZGS - ? -
24 PsiBlast_CBE 61.2449% -14 - C1 -2G76 9.1 SERA_HUMAN
62 PsiBlast_CBE 61.0933%-125 - C1 -4ZGS - ? -
61 PsiBlast_CBE 61.0533%-129 - C1 -4ZGS - ? -
66 PsiBlast_CBE 60.7233%-125 - C1 -4ZGS - ? -
4 PsiBlast_PDB 59.9349% -16 - C1 -2G76 9.4 SERA_HUMAN
64 PsiBlast_CBE 59.7733%-136 - C1 -4ZGS - ? -
68 PsiBlast_CBE 59.2333%-131 - C1 -4ZGS - ? -
113 HHSearch 59.0949% -14 - C1 -2G76 9.4 SERA_HUMAN
119 HHSearch 54.7036% 14 - C1 -5AOV 6.9 ?
125 HHSearch 54.1338% -11 - C1 -1WWK 8.5 ?
6 PsiBlast_PDB 53.1139% 4 - C1 -1WWK 8.8 ?
25 PsiBlast_CBE 52.2839% -3 - C1 -1WWK 9.5 ?
124 HHSearch 41.6132% 34 - C1 -3JTM 2.4 FDH_ARATH