@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu23080: (2016-07-06 )
MNVLTIKGVSIGEGMPKIIIPLMGKTEKQILNEAEAVKLLNPDIVEWRVDVFEKANDREAVTKLISKLRKSLEDKLFLFTFRTHKEGGSMEMDESSYLALLESAIQTKDIDLIDIELFSGDANVKALVSLAEENNVYVVMSNHDFEKTPVKDEIISRLRKMQDLGAHIPKMAVMPNDTGDLLTLLDATYTMKTIYADRPIITMSMAATGLISRLSGEVFGSACTFGAGEEASAPGQIPVSELRSVLDILHKNTRG

Atome Classification :

(51 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

CIT_A_3(3LB0)
AROD_SALTY
[Raw transfer]




DQA_B_4(3NNT)
AROD_SALTY
[Raw transfer]




CIT_B_8(4CNN)
AROD_SALTI
[Raw transfer]




9C4_B_8(4CNP)
AROD_SALTI
[Raw transfer]




9C4_A_3(4CNP)
AROD_SALTI
[Raw transfer]




QIC_A_3(4GUI)
AROD_SALTY
[Raw transfer]




DQA_A_3(3NNT)
AROD_SALTY
[Raw transfer]




QIC_B_4(4IUO)
AROD_SALTY
[Raw transfer]




SKM_A_3(4GUJ)
AROD_SALTY
[Raw transfer]




QIC_A_3(4IUO)
AROD_SALTY
[Raw transfer]




9PY_B_6(4CNO)
AROD_SALTI
[Raw transfer]




3DS_A_4(4GUG)
AROD_SALTY
[Raw transfer]




QIC_B_6(4GUI)
AROD_SALTY
[Raw transfer]




SKM_B_7(4GUJ)
AROD_SALTY
[Raw transfer]




VAU_A_2(4UIO)
AROD_SALTI
[Raw transfer]




9PY_D_8(4CNO)
AROD_SALTI
[Raw transfer]




9PY_A_5(4CNO)
AROD_SALTI
[Raw transfer]




DHS_F_6(1L9W)
AROD_SALTI
[Raw transfer]




DHS_E_5(1L9W)
AROD_SALTI
[Raw transfer]




DHS_A_3(1QFE)
AROD_SALTI
[Raw transfer]




DHS_H_8(1L9W)
AROD_SALTI
[Raw transfer]




DHS_G_7(1L9W)
AROD_SALTI
[Raw transfer]




WPL_B_7(4CLM)
AROD_SALTI
[Raw transfer]




DHS_C_7(3JS3)
AROD_PEPD6
[Raw transfer]




3DS_A_3(4GUH)
AROD_SALTY
[Raw transfer]




DHS_B_4(1QFE)
AROD_SALTI
[Raw transfer]




DHS_A_3(1QFE)
AROD_SALTI
[Raw transfer]




3DS_B_5(4GUG)
AROD_SALTY
[Raw transfer]




MLA_A_10(3S42)
AROD_SALTY
[Raw transfer]




DHS_A_5(3JS3)
AROD_PEPD6
[Raw transfer]




DHS_D_8(3JS3)
AROD_PEPD6
[Raw transfer]




DHS_B_6(3JS3)
AROD_PEPD6
[Raw transfer]




3DS_B_5(4GUH)
AROD_SALTY
[Raw transfer]




9PY_C_7(4CNO)
AROD_SALTI
[Raw transfer]




MLA_B_3(3S42)
AROD_SALTY
[Raw transfer]




SHL_A_7(4H3D)
AROD_PEPD6
[Raw transfer]




SHL_B_9(4H3D)
AROD_PEPD6
[Raw transfer]




SHL_D_13(4H3D)
AROD_PEPD6
[Raw transfer]




SHL_A_7(4H3D)
AROD_PEPD6
[Raw transfer]




SHL_C_12(4H3D)
AROD_PEPD6
[Raw transfer]




DHK_B_4(1SFJ)
AROD_STAAR
[Raw transfer]




DHK_A_3(1SFJ)
AROD_STAAR
[Raw transfer]




SIN_B_9(4GFS)
AROD_SALTY
[Raw transfer]




33 PsiBlast_CBE 89.1854%-107 - C4 -3M7W - AROD_SALTY -
45 PsiBlast_CBE 89.1455%-116 - C4 -4CNP 4.0 AROD_SALTI
46 PsiBlast_CBE 89.0755%-113 - C4 -4CNP 4.0 AROD_SALTI
23 PsiBlast_CBE 88.6954%-109 - C4 -4GUJ 3.5 AROD_SALTY
26 PsiBlast_CBE 88.6754%-110 - C4 -3OEX - AROD_SALTY -
51 PsiBlast_CBE 88.6655%-114 - C4 -4CLM 3.6 AROD_SALTI
28 PsiBlast_CBE 88.5254%-106 - C4 -3OEX - AROD_SALTY -
44 PsiBlast_CBE 88.4055%-111 - C4 -4UIO 4.3 AROD_SALTI
41 PsiBlast_CBE 88.3655%-109 - C4 -1L9W 4.1 AROD_SALTI
6 PsiBlast_PDB 88.2254%-105 - C4 -4GFS - AROD_SALTY -
32 PsiBlast_CBE 88.0754%-102 - C4 -3M7W - AROD_SALTY -
21 PsiBlast_CBE 88.0254%-102 - C4 -3S42 2.8 AROD_SALTY
17 PsiBlast_PDB 88.0155%-113 - C4 -1GQN - AROD_SALTI -
30 PsiBlast_CBE 87.9954%-101 - C4 -3M7W - AROD_SALTY -
29 PsiBlast_CBE 87.8654%-103 - C4 -3M7W - AROD_SALTY -
8 PsiBlast_PDB 87.7754%-105 - C4 -4GUJ 5.6 AROD_SALTY
24 PsiBlast_CBE 87.7154%-105 - C4 -4GUI 3.9 AROD_SALTY
42 PsiBlast_CBE 87.6755%-110 - C4 -1L9W 3.9 AROD_SALTI
65 Fugue 87.6655%-112 - C4 -1QFE 4.5 AROD_SALTI
15 PsiBlast_PDB 87.6355%-113 - C4 -1QFE 4.5 AROD_SALTI
47 PsiBlast_CBE 87.6055%-111 - C4 -4CNO 4.1 AROD_SALTI
39 PsiBlast_CBE 87.5953%-109 - C4 -3NNT 5.3 AROD_SALTY
48 PsiBlast_CBE 87.5355%-112 - C4 -4CNO 3.3 AROD_SALTI
43 PsiBlast_CBE 87.5255%-108 - C4 -1L9W 4.1 AROD_SALTI
16 PsiBlast_PDB 87.4755%-107 - C4 -1L9W 4.5 AROD_SALTI
25 PsiBlast_CBE 87.4554%-112 - C4 -4GFS 3.6 AROD_SALTY
50 PsiBlast_CBE 87.4355%-119 - C4 -4CNN 4.5 AROD_SALTI
13 PsiBlast_PDB 87.4253%-106 - C4 -3NNT 5.3 AROD_SALTY
11 PsiBlast_PDB 87.3753%-107 - C4 -4GUH 4.5 AROD_SALTY
2 PsiBlast_PDB 87.3454% -99 - C4 -3LB0 3.9 AROD_SALTY
7 PsiBlast_PDB 87.2954%-105 - C4 -4GUI 5.2 AROD_SALTY
38 PsiBlast_CBE 87.1553%-105 - C4 -4IUO 5.1 AROD_SALTY
40 PsiBlast_CBE 87.1455%-111 - C4 -1QFE 4.7 AROD_SALTI
18 PsiBlast_PDB 87.1355%-119 - C4 -4CNO 4.1 AROD_SALTI
14 PsiBlast_PDB 87.0353%-107 - C4 -4IUO 4.6 AROD_SALTY
49 PsiBlast_CBE 86.8255%-116 - C4 -4CNO 3.7 AROD_SALTI
57 PsiBlast_CBE 86.5550%-119 - C4 -3JS3 4.9 AROD_PEPD6
10 PsiBlast_PDB 86.1453%-111 - C4 -4GUG 3.0 AROD_SALTY
34 PsiBlast_CBE 86.1353%-103 - C4 -4GUH 5.0 AROD_SALTY
56 PsiBlast_CBE 85.9250%-115 - C4 -3JS3 4.1 AROD_PEPD6
35 PsiBlast_CBE 85.7153%-116 - C4 -4GUG 4.6 AROD_SALTY
59 PsiBlast_CBE 85.7050%-114 - C4 -3JS3 4.5 AROD_PEPD6
54 PsiBlast_CBE 85.5950%-122 - C4 -4H3D 2.9 AROD_PEPD6
52 PsiBlast_CBE 85.3550%-123 - C4 -4H3D 2.8 AROD_PEPD6
58 PsiBlast_CBE 85.1250%-116 - C4 -3JS3 3.3 AROD_PEPD6
55 PsiBlast_CBE 82.9550%-123 - C4 -4H3D 3.1 AROD_PEPD6
53 PsiBlast_CBE 82.9150%-122 - C4 -4H3D 3.1 AROD_PEPD6
3 PsiBlast_PDB 77.2254% -97 - C4 -3S42 3.7 AROD_SALTY
78 HHSearch 75.1450% -5 - C4 -4H3D 3.1 AROD_PEPD6
60 PsiBlast_CBE 63.1535% -64 - C4 -1SFJ 3.5 AROD_STAAR
61 PsiBlast_CBE 62.6535% -60 - C4 -1SFJ 3.2 AROD_STAAR