@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu23110: (2016-07-06 )
MKFWKSVVGKLWFTILSLVLIVLFILTVLLLEFIENYHVEEAENDLTQLANKVAVILENHEDQALARSITWELADNLTSIAIIQDEKNHWYSPNDKNRLSSITVEQIQHDKDLNKALKDHKKVSKRTGLSDTDTDNERLIVGVPYEKDGKKGMVFLSQSLLAVKDTTKHTTRYIFLAAGIAIVLTTFFAFFLSSRVTYPLRKMREGAQDLAKGKFDTKIPILTQDEIGELATAFNQMGRQLNFHINALNQEKEQLSNILSSMADGVITINIDGTILVTNPPAERFLQAWYYEQNMNIKEGDNLPPEAKELFQNAVSTEKEQMIEMTLQGRSWVLLMSPLYAESHVRGAVAVLRDMTEERRLDKLREDFIANVSHELRTPISMLQGYSEAIVDDIASSEEDRKEIAQIIYDESLRMGRLVNDLLDLARMESGHTGLHYEKINVNEFLEKIIRKFSGVAKEKNIALDHDISLTEEEFMFDEDKMEQVFTNLIDNALRHTSAGGSVSISVHSVKDGLKIDIKDSGSGIPEEDLPFIFERFYKADKARTRGRAGTGLGLAIVKNIVEAHNGSITVHSRIDKGTTFSFYIPTKR

Atome Classification :

(24 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_3(4CB0)
CPXA_ECOLI
[Raw transfer]



ATP_A_4(3SL2)

[Raw transfer]



ATP_A_3(4BIV)
CPXA_ECOLI
[Raw transfer]



ADP_A_5(4BIY)
CPXA_ECOLI
[Raw transfer]



AN2_A_3(4U7O)
?
[Raw transfer]



AN2_B_4(4U7O)
?
[Raw transfer]



ADP_B_8(3DGE)
?
[Raw transfer]



ADP_B_13(4JAV)
?
[Raw transfer]



ADP_A_2(2C2A)
?
[Raw transfer]
21 PsiBlast_CBE 68.9897%-107 - C5 -4ZR7 - RESE_BACSU -
55 HHSearch 68.8630% 25 - C3 -4I5S - ? -
2 PsiBlast_PDB 67.9031% 59 - C3 -4I5S - ? -
45 Fugue 67.7430% 8 - C3 -4I5S - ? -
4 PsiBlast_PDB 65.0836% 20 - C3 -4U7O - ? -
60 HHSearch 64.6437% 28 - C3 -4U7O 8.7 ?
1 PsiBlast_PDB 64.6297% -82 - C5 -4ZR7 - RESE_BACSU -
48 Fugue 62.6296% -75 * C5 *4ZR7 - RESE_BACSU -
14 PsiBlast_PDB 62.1028%-107 - C3 -4BIX - CPXA_ECOLI -
19 PsiBlast_PDB 61.5728% -90 - C3 -4CB0 6.5 CPXA_ECOLI
65 HHSearch 60.5531% -93 - C3 -4Q20 - DIVL_CAUCR -
16 PsiBlast_PDB 60.0328% -98 - C3 -4BIZ - CPXA_ECOLI -
15 PsiBlast_PDB 58.7328%-114 - C3 -4BIY 5.5 CPXA_ECOLI
57 HHSearch 58.5426%-109 - C3 -4BIX - CPXA_ECOLI -
18 PsiBlast_PDB 58.4628% -89 - C3 -4BIV 6.3 CPXA_ECOLI
13 PsiBlast_PDB 58.1328% -87 - C3 -4BIW - CPXA_ECOLI -
3 PsiBlast_PDB 57.9736% 9 - C3 -4U7N - ? -
12 PsiBlast_PDB 57.6828%-102 - C3 -4BIU - CPXA_ECOLI -
24 PsiBlast_CBE 57.1132% 67 - C3 -3DGE 7.2 ?
46 Fugue 57.0427%-121 - C3 -1ID0 - -
76 HHSearch 54.0341% -68 - C3 -3SL2 7.6
23 PsiBlast_CBE 53.9832% 65 - C3 -4JAV 6.2 ?
22 PsiBlast_CBE 53.4636% 28 - C3 -4U7O 8.6 ?
64 HHSearch 53.4533% 55 - C3 -2C2A 5.5 ?