@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu23190: (2016-07-06 )
MRIFKKAVFVIMISFLIATVNVNTAHAAIDVSAKSAIIIDGASGRVLYAKDEHQKRRIASITKIMTAVLAIESGKMDQTVTVSANAVRTEGSAIYLTEGQKVKLKDLVYGLMLRSGNDAAVAIAEHVGGSLDGFVYMMNQKAEQLGMKNTRFQNPHGLDDHENHYSTAYDMAILTKYAMKLKDYQKISGTKIYKAETMESVWKNKNKLLTMLYPYSTGGKTGYTKLAKRTLVSTASKDGIDLIAVTINDPNDWDDHMKMFNYVFEHYQTYLIAKKGDIPKLKGTFYESKAFIKRDITYLLTEEEKENVKINTTLLKPKKAWEKDASKIPDIVGHMEIMFNDATIAKVPIYYENERHQKPKKQFFETFKSIFLNAAGGAKWSI

Atome Classification :

(26 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

CFX_A_2(3MZE)
DACA_ECOLI
[Raw transfer]




IM2_A_2(3MZF)
DACA_ECOLI
[Raw transfer]




MER_A_2(4PPR)
?
[Raw transfer]




MER_A_2(4PPR)
?
[Raw transfer]




GOL_A_4(3BEC)
DACA_ECOLI
[Raw transfer]




HJ3_A_2(3BEB)
DACA_ECOLI
[Raw transfer]




CXV_A_2(3MZD)
DACA_ECOLI
[Raw transfer]




HJ2_A_3(3BEC)
DACA_ECOLI
[Raw transfer]




SIN_A_3(4K91)
?
[Raw transfer]




SIN_B_5(4K91)
?
[Raw transfer]




SIN_A_3(4K91)
?
[Raw transfer]




BO9_A_2(1Z6F)
DACA_ECOLI
[Raw transfer]




CIT_A_9(3MFD)
DACB_BACSU
[Raw transfer]




CIT_A_9(3MFD)
DACB_BACSU
[Raw transfer]




113 HHSearch 99.24100% -88 - C5 -3MFD 3.0 DACB_BACSU
1 PsiBlast_PDB 98.1995% -88 - C5 -3MFD 3.0 DACB_BACSU
120 HHSearch 63.0432% -37 - C5 -4PPR 3.3 ?
3 PsiBlast_PDB 61.8731% -36 - C5 -4PPR 3.3 ?
123 HHSearch 61.0030% -35 - C5 -4RYE - ? -
116 HHSearch 60.6330% 24 - C5 -3ITA - DACC_ECOLI -
114 HHSearch 60.2828% 26 - C5 -3MZF - DACA_ECOLI -
5 PsiBlast_PDB 57.2429% 26 - C5 -3IT9 - DACC_ECOLI -
115 HHSearch 56.8033% 43 - C5 -4K91 3.8 ?
6 PsiBlast_PDB 56.4029% 28 - C5 -3ITA - DACC_ECOLI -
2 PsiBlast_PDB 55.6433% 46 - C5 -4K91 3.8 ?
117 HHSearch 55.5229% 44 - C5 -3A3J - DACA_HAEIN -
7 PsiBlast_PDB 55.4329% 21 - C5 -3ITB - DACC_ECOLI -
17 PsiBlast_PDB 55.2630% -18 - C5 -4RYE - ? -
21 PsiBlast_CBE 54.3233% 48 - C5 -4K91 0.9 ?
118 HHSearch 54.1025% 15 - C5 -1XP4 - ? -
121 HHSearch 51.6735% 38 * C5 *1ES5 - DACX_STRSK -
106 Fugue 51.2226% 44 - C5 -1HD8 - DACA_ECOLI -
4 PsiBlast_PDB 51.1332% 41 - C5 -3A3J - DACA_HAEIN -
122 HHSearch 50.8228% 18 - C5 -1TVF - ? -
11 PsiBlast_PDB 48.7835% 20 - C5 -3BEB 3.7 DACA_ECOLI
14 PsiBlast_PDB 47.2935% 19 - C5 -3MZE Error DACA_ECOLI
12 PsiBlast_PDB 47.2535% 17 - C5 -3BEC 3.1 DACA_ECOLI
15 PsiBlast_PDB 46.8935% 22 - C5 -3MZF 2.8 DACA_ECOLI
13 PsiBlast_PDB 46.7035% 18 - C5 -3MZD 3.3 DACA_ECOLI
10 PsiBlast_PDB 45.7035% 19 - C5 -1Z6F 2.5 DACA_ECOLI