@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu23260: (2016-07-06 )
MFHPIEEALDALKKGEVIIVVDDEDRENEGDFVALAEHATPEVINFMATHGRGLICTPLSEEIADRLDLHPMVEHNTDSHHTAFTVSIDHRETKTGISAQERSFTVQALLDSKSVPSDFQRPGHIFPLIAKKGGVLKRAGHTEAAVDLAEACGSPGAGVICEIMNEDGTMARVPELIEIAKKHQLKMITIKDLIQYRYNLTTLVEREVDITLPTDFGTFKVYGYTNEVDGKEHVAFVMGDVPFGEEPVLVRVHSECLTGDVFGSHRCDCGPQLHAALNQIAAEGRGVLLYLRQEGRGIGLINKLKAYKLQEQGYDTVEANEALGFLPDLRNYGIGAQILRDLGVRNMKLLTNNPRKIAGLEGYGLSISERVPLQMEAKEHNKKYLQTKMNKLGHLLHF

Atome Classification :

(34 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

5RP_A_3(4P77)
RIBB_VIBCH
[Raw transfer]




5RP_B_5(4P77)
RIBB_VIBCH
[Raw transfer]




5RP_D_4(1TKU)
RIB3_CANAL
[Raw transfer]




5SP_A_3(3LQU)
RIBB_SALTY
[Raw transfer]




RES_B_7(4P6P)
RIBB_VIBCH
[Raw transfer]




RES_A_3(4P6P)
RIBB_VIBCH
[Raw transfer]




5RP_B_4(1SNN)
RIBB_METJA
[Raw transfer]




5RP_C_3(1TKU)
RIB3_CANAL
[Raw transfer]




RES_A_3(4P6C)
RIBB_VIBCH
[Raw transfer]




RES_B_4(4P6C)
RIBB_VIBCH
[Raw transfer]




5RP_A_3(4P8E)
RIBB_VIBCH
[Raw transfer]




5RP_A_3(1SNN)
RIBB_METJA
[Raw transfer]




5RP_A_3(1PVY)
RIBB_METJA
[Raw transfer]




5RP_A_3(1SNN)
RIBB_METJA
[Raw transfer]




5RP_B_8(4P8E)
RIBB_VIBCH
[Raw transfer]




5RP_B_4(1PVY)
RIBB_METJA
[Raw transfer]




GOL_A_5(1K4O)
RIB3_MAGO7
[Raw transfer]




5RP_A_2(2RIU)
RIB3_CANAL
[Raw transfer]




GOL_A_8(4FFJ)
?
[Raw transfer]




GOL_A_8(4FFJ)
?
[Raw transfer]




GOL_B_10(3MIO)
RIBBA_MYCTA
[Raw transfer]




GOL_A_5(3MIO)
RIBBA_MYCTA
[Raw transfer]




GOL_A_5(3MIO)
RIBBA_MYCTA
[Raw transfer]




GOL_B_12(3MIO)
RIBBA_MYCTA
[Raw transfer]




EDO_A_3(4P6D)
RIBB_VIBCH
[Raw transfer]




EDO_A_3(4P6D)
RIBB_VIBCH
[Raw transfer]




51 HHSearch 90.1556% -58 - C7 -4I14 - RIBBA_MYCTA -
1 PsiBlast_PDB 89.4755% -57 - C7 -4I14 - RIBBA_MYCTA -
55 HHSearch 74.5757%-126 - C7 -4FFJ 3.0 ?
2 PsiBlast_PDB 74.5357%-126 - C7 -4FFJ 3.0 ?
24 PsiBlast_CBE 70.9149% -90 - C7 -3LS6 - RIBB_SALTY -
9 PsiBlast_PDB 70.9049% -88 - C7 -3LS6 - RIBB_SALTY -
32 PsiBlast_CBE 70.6446% -82 - C7 -4P8E 4.0 RIBB_VIBCH
17 PsiBlast_PDB 70.1346% -80 - C7 -4P6C 4.7 RIBB_VIBCH
54 HHSearch 69.9850% -95 - C7 -1G57 - RIBB_ECOLI -
37 PsiBlast_CBE 69.8646% -79 - C7 -4P6C 4.8 RIBB_VIBCH
27 PsiBlast_CBE 69.6449% -96 - C7 -3LRJ - RIBB_SALTY -
53 HHSearch 69.6250% -81 - C7 -1TKS - RIB3_CANAL -
33 PsiBlast_CBE 69.6246% -84 - C7 -4P8E 3.9 RIBB_VIBCH
35 PsiBlast_CBE 69.5546% -80 - C7 -4P6P 4.3 RIBB_VIBCH
34 PsiBlast_CBE 69.4846% -88 - C7 -4P77 5.1 RIBB_VIBCH
7 PsiBlast_PDB 69.3949% -88 - C7 -3LQU 3.5 RIBB_SALTY
28 PsiBlast_CBE 69.3649% -89 - C7 -3LQU - RIBB_SALTY -
26 PsiBlast_CBE 69.3649% -99 - C7 -3LRJ - RIBB_SALTY -
19 PsiBlast_PDB 69.3546% -82 - C7 -4P6P 4.5 RIBB_VIBCH
20 PsiBlast_PDB 69.2646% -82 - C7 -4P77 4.8 RIBB_VIBCH
30 PsiBlast_CBE 68.5850% -81 - C7 -1TKU 3.1 RIB3_CANAL
14 PsiBlast_PDB 68.2750% -76 - C7 -1TKU 3.1 RIB3_CANAL
60 HHSearch 68.1951% -80 - C7 -3MIO 2.9 RIBBA_MYCTA
58 HHSearch 68.0546% -90 - C7 -4P6D 2.7 RIBB_VIBCH
16 PsiBlast_PDB 67.9850% -78 - C7 -2RIU 3.6 RIB3_CANAL
18 PsiBlast_PDB 67.6246% -90 - C7 -4P6D 2.7 RIBB_VIBCH
29 PsiBlast_CBE 67.4551% -80 - C7 -3MIO 3.1 RIBBA_MYCTA
11 PsiBlast_PDB 66.9851% -83 - C7 -3MIO 2.9 RIBBA_MYCTA
41 PsiBlast_CBE 65.4143% -56 - C7 -1K4O 3.8 RIB3_MAGO7
57 HHSearch 57.4537% -2 - C7 -1SNN 4.2 RIBB_METJA
47 PsiBlast_CBE 57.2433% 0 - C7 -1SNN 4.2 RIBB_METJA
49 PsiBlast_CBE 56.7833% -3 - C7 -1PVY 3.8 RIBB_METJA
50 PsiBlast_CBE 56.7433% 1 - C7 -1PVY 4.4 RIBB_METJA
48 PsiBlast_CBE 56.3333% 1 - C7 -1SNN 4.2 RIBB_METJA