@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu23280: (2016-07-06 )
MEEYYMKLALDLAKQGEGQTESNPLVGAVVVKDGQIVGMGAHLKYGEAHAEVHAIHMAGAHAEGADIYVTLEPCSHYGKTPPCAELIINSGIKRVFVAMRDPNPLVAGRGISMMKEAGIEVREGILADQAERLNEKFLHFMRTGLPYVTLKAAASLDGKIATSTGDSKWITSEAARQDAQQYRKTHQSILVGVGTVKADNPSLTCRLPNVTKQPVRVILDTVLSIPEDAKVICDQIAPTWIFTTARADEEKKKRLSAFGVNIFTLETERIQIPDVLKILAEEGIMSVYVEGGSAVHGSFVKEGCFQEIIFYFAPKLIGGTHAPSLISGEGFQSMKDVPLLQFTDITQIGRDIKLTAKPTKE

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NDP_A_4(2HXV)
?
[Raw transfer]




NDP_A_4(2HXV)
?
[Raw transfer]




GOL_A_6(2HXV)
?
[Raw transfer]




GOL_A_8(2HXV)
?
[Raw transfer]




4 PsiBlast_PDB 95.09100%-107 - C3 -4G3M - RIBD_BACSU -
29 PsiBlast_CBE 94.53100%-106 - C3 -2D5N - RIBD_BACSU -
22 PsiBlast_CBE 94.06100%-106 - C3 -4G3M - RIBD_BACSU -
61 HHSearch 93.85100%-102 - C3 -2B3Z - RIBD_BACSU -
51 Fugue 93.85100%-102 - C3 -2B3Z - RIBD_BACSU -
1 PsiBlast_PDB 93.85100%-102 - C3 -2B3Z - RIBD_BACSU -
32 PsiBlast_CBE 93.80100%-106 - C3 -2B3Z - RIBD_BACSU -
25 PsiBlast_CBE 93.69100%-104 - C3 -3EX8 - RIBD_BACSU -
31 PsiBlast_CBE 93.61100%-106 - C3 -2B3Z - RIBD_BACSU -
21 PsiBlast_CBE 93.42100%-102 - C3 -4G3M - RIBD_BACSU -
27 PsiBlast_CBE 93.34100%-108 - C3 -2D5N - RIBD_BACSU -
3 PsiBlast_PDB 93.34100%-100 - C3 -3EX8 - RIBD_BACSU -
23 PsiBlast_CBE 93.20100% -98 - C3 -4G3M - RIBD_BACSU -
2 PsiBlast_PDB 92.82100%-103 - C3 -2D5N - RIBD_BACSU -
26 PsiBlast_CBE 92.47100%-103 - C3 -3EX8 - RIBD_BACSU -
30 PsiBlast_CBE 92.19100%-102 - C3 -2B3Z - RIBD_BACSU -
28 PsiBlast_CBE 91.98100%-105 - C3 -2D5N - RIBD_BACSU -
24 PsiBlast_CBE 91.97100%-104 - C3 -3EX8 - RIBD_BACSU -
5 PsiBlast_PDB 67.5542% -32 - C3 -3ZPC - ? -
6 PsiBlast_PDB 66.6342% -31 - C3 -3ZPG - ? -
64 HHSearch 61.9039% -8 - C3 -2HXV 10.0 ?
7 PsiBlast_PDB 58.8942% -7 - C3 -2HXV 10.2 ?