@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu23480: (2016-07-06 )
MKRLLSTLLIGIMLLTFAPSAFAKQDGKRTSELAHEAKSAVLIERDTGKVLYNKNSNERLAPASMTKIMTMLLIMEALDKGKIKMSDKVRTSEHAASMGGSQIFLEPGEEMTVKEMLKGIAIASGNDASVAMAEFISGSEEEFVKKMNKKAKELGLKNTSFKNPTGLTEEGHYSSAYDMAIMAKELLKYESITKFTGTYEDYLRENTDKKFWLVNTNRLIKFYPGVDGVKTGYTGEAKYCLTASAKKGNMRAIAVVFGASTPKERNAQVTKMLDFAFSQYETHPLYKRNQTVAKVKVKKGKQKFIELTTSEPISILTKKGEDMNDVKKEIKMKDNISAPIQKGQELGTLVLKKDGEVLAESPVAAKEDMKKAGFITFLKRTMGDWTKFK

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

UNL_H_8(1TVF)
?
[Raw transfer]



SIN_B_5(4K91)
?
[Raw transfer]



IM2_A_2(3MZF)
DACA_ECOLI
[Raw transfer]



CIT_A_3(3MFD)
DACB_BACSU
[Raw transfer]



IM2_A_2(3MZF)
DACA_ECOLI
[Raw transfer]



HJ2_A_3(3BEC)
DACA_ECOLI
[Raw transfer]



HJ3_A_2(3BEB)
DACA_ECOLI
[Raw transfer]



CIT_A_3(3MFD)
DACB_BACSU
[Raw transfer]



SIN_A_3(4K91)
?
[Raw transfer]



CHAIN_L_5(3ITB)
DACC_ECOLI
[Raw transfer]
-
1 PsiBlast_PDB 97.0837% -58 - C4 -4K91 - ? -
21 PsiBlast_CBE 96.7837% -57 - C4 -4K91 1.6 ?
114 HHSearch 90.8137% -20 - C4 -4K91 4.0 ?
103 Fugue 78.1932% -4 - C4 -1HD8 - DACA_ECOLI -
23 PsiBlast_CBE 77.4934% 34 - C4 -3ITB - DACC_ECOLI -
117 HHSearch 77.4234% 12 - C4 -3MFD 3.0 DACB_BACSU
13 PsiBlast_PDB 77.0634% 19 - C4 -1HD8 - DACA_ECOLI -
22 PsiBlast_CBE 76.9734% 35 - C4 -3ITB 3.0 DACC_ECOLI
115 HHSearch 76.8736% 41 - C4 -3ITA - DACC_ECOLI -
25 PsiBlast_CBE 76.4834% 15 - C4 -3ITA - DACC_ECOLI -
113 HHSearch 76.4134% 38 - C4 -3MZF 4.0 DACA_ECOLI
116 HHSearch 76.0134% 45 - C4 -3A3J - DACA_HAEIN -
12 PsiBlast_PDB 75.9834% 40 - C4 -3MZF 3.6 DACA_ECOLI
8 PsiBlast_PDB 75.8234% 42 - C4 -3BEB 3.7 DACA_ECOLI
7 PsiBlast_PDB 75.7534% 42 - C4 -1Z6F - DACA_ECOLI -
10 PsiBlast_PDB 75.3934% 41 - C4 -3MZD - DACA_ECOLI -
2 PsiBlast_PDB 75.3634% 34 - C4 -3IT9 - DACC_ECOLI -
4 PsiBlast_PDB 75.3134% 32 - C4 -3ITB - DACC_ECOLI -
28 PsiBlast_CBE 75.1534% 32 - C4 -3IT9 - DACC_ECOLI -
24 PsiBlast_CBE 75.0834% 35 - C4 -3ITB - DACC_ECOLI -
9 PsiBlast_PDB 74.8134% 42 - C4 -3BEC 2.3 DACA_ECOLI
17 PsiBlast_PDB 74.3937% -21 - C4 -3MFD 3.2 DACB_BACSU
120 HHSearch 66.0031% 33 - C4 -1TVF 2.2 ?