@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu23850: (2016-07-07 )
MKTNQQPKAVIVIFGATGDLAKRKLYPSIHRLYQNGQIGEEFAVVGVGRRPWSNEDLRQTVKTSISSSADKHIDDFTSHFYYHPFDVTNPGSYQELNVLLNQLEDTYQIPNNRMFYLAMAPEFFGTIAKTLKSEGVTATTGWSRLVIEKPFGHDLPSAQALNKEIREAFTEDQIYRIDHYLGKQMVQNIEVIRFANAIFEPLWTNRYISNIQITSSESLGVEDRARYYEKSGALRDMVQNHIMQMVALLAMEPPIKLNTEEIRSEKVKVLRALRPIAKDEVDEYFVRGQYHAGEIDGVPVPAYTDEDNVAPDSNTETFVAGKLLIDNFRWAGVPFYIRTGKRMKEKSTKIVVQFKDIPMNLYYGNENNMNPNLLVIHIQPDEGITLYLNAKKLGGAAHAQPIKLDYCSNCNDELNTPEAYEKLIHDCLLGDATNFAHWDEVALSWSFVDSISETWAANKTLSPNYESGSMGPKESDDLLVKDGLHWWNI

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAP_A_5(1H9A)
G6PD_LEUME
[Raw transfer]




NAD_A_3(1H94)
G6PD_LEUME
[Raw transfer]




NAP_C_3(2DPG)
G6PD_LEUME
[Raw transfer]




NDP_A_4(1E7Y)
G6PD_LEUME
[Raw transfer]




NAP_A_3(2BH9)
G6PD_HUMAN
[Raw transfer]




NAP_A_3(2BH9)
G6PD_HUMAN
[Raw transfer]




BG6_B_7(2BHL)
G6PD_HUMAN
[Raw transfer]




BG6_A_5(2BHL)
G6PD_HUMAN
[Raw transfer]




BG6_A_2(1E7Y)
G6PD_LEUME
[Raw transfer]




TLO_A_3(3RC1)
?
[Raw transfer]




12 PsiBlast_PDB 85.1535% 0 - C- -1QKI - G6PD_HUMAN -
42 HHSearch 79.4145% -6 - C1 -1DPG - G6PD_LEUME -
21 PsiBlast_CBE 78.8545% 12 - C1 -1DPG - G6PD_LEUME -
4 PsiBlast_PDB 78.3845% 10 - C1 -1DPG - G6PD_LEUME -
6 PsiBlast_PDB 77.9845% 12 - C1 -1H94 6.6 G6PD_LEUME
32 Fugue 77.9744% 3 - C1 -1DPG - G6PD_LEUME -
1 PsiBlast_PDB 77.5145% 13 - C1 -1E77 - G6PD_LEUME -
2 PsiBlast_PDB 77.5045% 14 - C1 -1H9A 10.8 G6PD_LEUME
8 PsiBlast_PDB 77.4745% 12 - C1 -1E7Y 5.8 G6PD_LEUME
3 PsiBlast_PDB 77.4745% 11 - C1 -1H9B - G6PD_LEUME -
7 PsiBlast_PDB 77.3445% 13 - C1 -1E7M - G6PD_LEUME -
9 PsiBlast_PDB 77.1345% 14 - C1 -2DPG 4.7 G6PD_LEUME
5 PsiBlast_PDB 76.8945% 12 - C1 -1H93 - G6PD_LEUME -
22 PsiBlast_CBE 70.8835% -1 - C1 -2BHL 3.8 G6PD_HUMAN
11 PsiBlast_PDB 70.1835% 1 - C1 -2BHL 3.5 G6PD_HUMAN
10 PsiBlast_PDB 69.6535% 6 - C1 -2BH9 5.5 G6PD_HUMAN
23 PsiBlast_CBE 69.4135% -4 - C1 -4EM5 - ? -
25 PsiBlast_CBE 69.3635% -6 - C1 -4EM5 - ? -
26 PsiBlast_CBE 69.3335% -5 - C1 -4E9I - ? -
13 PsiBlast_PDB 69.3135% -5 - C1 -4E9I - ? -
43 HHSearch 69.2336% 4 - C1 -2BH9 5.5 G6PD_HUMAN