@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu23960: (2016-07-07 )
MIKVEKLSKSFGKHEVLKNISTTIAEGEVVAVIGPSGSGKSTFLRCLNLLEKPNGGTITIKDTEITKPKTNTLKVRENIGMVFQHFHLFPHKTVLENIMYAPVNVKKESKQAAQEKAEDLLRKVGLFEKRNDYPNRLSGGQKQRVAIARALAMNPDIMLFDEPTSALDPEMVKEVLQVMKELVETGMTMVIVTHEMGFAKEVADRVLFMDQGMIVEDGNPKEFFMSPKSKRAQDFLEKIL

Atome Classification :

(34 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_6(4YMV)
?
[Raw transfer]




ATP_A_5(1B0U)
HISP_SALTY
[Raw transfer]




ANP_J_5(3C41)
?
[Raw transfer]




ATP_J_5(4YMU)
?
[Raw transfer]




AGS_B_6(3C4J)
?
[Raw transfer]




ATP_A_7(4YMU)
?
[Raw transfer]




ATP_J_5(4YMV)
?
[Raw transfer]




ATP_A_3(3FVQ)
FBPC_NEIG1
[Raw transfer]




ANP_K_6(3C41)
?
[Raw transfer]




ATP_A_5(1L2T)
Y796_METJA
[Raw transfer]




ATP_B_6(3FVQ)
FBPC_NEIG1
[Raw transfer]




ADP_A_5(2Q0H)
?
[Raw transfer]




AGS_A_4(3C4J)
?
[Raw transfer]




ATP_B_6(1L2T)
Y796_METJA
[Raw transfer]




ADP_B_6(2Q0H)
?
[Raw transfer]




ADP_A_5(2OLJ)
?
[Raw transfer]




ADP_A_3(3TIF)
Y796_METJA
[Raw transfer]




ADP_B_6(2OLJ)
?
[Raw transfer]




ADP_A_2(4U00)
?
[Raw transfer]




AT4_B_6(2OLK)
?
[Raw transfer]




AT4_D_8(2OLK)
?
[Raw transfer]




AT4_C_7(2OLK)
?
[Raw transfer]




ADP_B_8(3TIF)
Y796_METJA
[Raw transfer]




AT4_A_5(2OLK)
?
[Raw transfer]




ATP_C_3(1VCI)
?
[Raw transfer]




LMT_A_7(4MKI)
ECFA2_CALS4
[Raw transfer]




LMT_B_4(4MKI)
ECFA2_CALS4
[Raw transfer]




3 PsiBlast_PDB 93.3062%-120 - C1 -4YMU 6.7 ?
29 PsiBlast_CBE 93.1963%-122 - C1 -2OLK 6.0 ?
9 PsiBlast_PDB 93.1563%-123 - C1 -2OUK - ? -
22 PsiBlast_CBE 92.1162%-124 - C1 -4YMU 6.0 ?
7 PsiBlast_PDB 91.9263%-129 - C1 -2OLJ 5.8 ?
21 PsiBlast_CBE 91.8362%-120 - C1 -4YMV 5.0 ?
23 PsiBlast_CBE 91.7963%-119 - C1 -3C41 6.0 ?
5 PsiBlast_PDB 91.2862%-117 - C1 -4YMW - ? -
6 PsiBlast_PDB 90.6963%-112 - C1 -3C41 6.2 ?
10 PsiBlast_PDB 90.3963%-119 - C1 -2Q0H 5.4 ?
122 HHSearch 90.2262%-117 - C1 -4YMU - ? -
1 PsiBlast_PDB 89.9062%-120 - C1 -4YMS - ? -
4 PsiBlast_PDB 89.8262%-121 - C1 -4YMV 5.3 ?
2 PsiBlast_PDB 89.7862%-119 - C1 -4YMT - ? -
121 HHSearch 89.7564%-127 - C1 -2OLJ - ? -
24 PsiBlast_CBE 89.5863%-123 - C1 -3C4J 5.2 ?
27 PsiBlast_CBE 89.4963%-122 - C1 -2OUK - ? -
31 PsiBlast_CBE 89.4063%-120 - C1 -2OLK 6.2 ?
11 PsiBlast_PDB 89.3463%-119 - C1 -3C4J 6.6 ?
30 PsiBlast_CBE 89.1663%-120 - C1 -2OLK 6.2 ?
25 PsiBlast_CBE 89.0163%-125 - C1 -2Q0H 5.8 ?
32 PsiBlast_CBE 89.0063%-116 - C1 -2OLJ 5.8 ?
12 PsiBlast_PDB 86.3955%-108 - C1 -4U00 5.8 ?
8 PsiBlast_PDB 85.7063%-122 - C1 -2OLK 6.2 ?
14 PsiBlast_PDB 75.9352% -1 - C1 -1B0U 6.2 HISP_SALTY
54 PsiBlast_CBE 63.1040% -42 - C1 -3FVQ 7.6 FBPC_NEIG1
45 PsiBlast_CBE 61.7836% -15 - C1 -1VCI 4.2 ?
55 PsiBlast_CBE 61.5640% -46 - C1 -3FVQ 7.0 FBPC_NEIG1
53 PsiBlast_CBE 61.4938% -23 - C1 -4MKI 2.2 ECFA2_CALS4
52 PsiBlast_CBE 60.7038% -21 - C1 -4MKI 2.1 ECFA2_CALS4
49 PsiBlast_CBE 47.2339% 48 - C1 -3TIF 6.1 Y796_METJA
47 PsiBlast_CBE 47.0740% 47 - C1 -1L2T 6.6 Y796_METJA
46 PsiBlast_CBE 45.3640% 51 - C1 -1L2T 6.2 Y796_METJA
48 PsiBlast_CBE 44.6639% 52 - C1 -3TIF 6.4 Y796_METJA