@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu24060: (2016-07-07 )
MATEYDVVILGGGTGGYVAAIRAAQLGLKTAVVEKEKLGGTCLHKGCIPSKALLRSAEVYRTAREADQFGVETAGVSLNFEKVQQRKQAVVDKLAAGVNHLMKKGKIDVYTGYGRILGPSIFSPLPGTISVERGNGEENDMLIPKQVIIATGSRPRMLPGLEVDGKSVLTSDEALQMEELPQSIIIVGGGVIGIEWASMLHDFGVKVTVIEYADRILPTEDLEISKEMESLLKKKGIQFITGAKVLPDTMTKTSDDISIQAEKDGETVTYSAEKMLVSIGRQANIEGIGLENTDIVTENGMISVNESCQTKESHIYAIGDVIGGLQLAHVASHEGIIAVEHFAGLNPHPLDPTLVPKCIYSSPEAASVGLTEDEAKANGHNVKIGKFPFMAIGKALVYGESDGFVKIVADRDTDDILGVHMIGPHVTDMISEAGLAKVLDATPWEVGQTIHPHPTLSEAIGEAALAADGKAIHF

Atome Classification :

(45 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FAD_B_8(2YQU)
?
[Raw transfer]




FAD_C_3(1OJT)
?
[Raw transfer]




FAD_A_3(2A8X)
DLDH_MYCTU
[Raw transfer]




FAD_C_3(1BHY)
?
[Raw transfer]




FAD_B_5(1EBD)
DLDH1_GEOSE
[Raw transfer]




FAD_A_3(2A8X)
DLDH_MYCTU
[Raw transfer]




FAD_A_3(3URH)
?
[Raw transfer]




FAD_B_6(2EQ7)
?
[Raw transfer]




FAD_D_4(1JEH)
DLDH_YEAST
[Raw transfer]




FAD_B_4(3LAD)
DLDH_AZOVI
[Raw transfer]




FAD_B_4(2QAE)
DLDH_TRYCR
[Raw transfer]




FAD_C_3(1JEH)
DLDH_YEAST
[Raw transfer]




FAD_A_4(1V59)
DLDH_YEAST
[Raw transfer]




FAD_A_4(1EBD)
DLDH1_GEOSE
[Raw transfer]




FAD_A_3(3II4)
DLDH_MYCTU
[Raw transfer]




FAD_C_3(1OJT)
?
[Raw transfer]




FAD_A_3(2EQ6)
?
[Raw transfer]




FAD_A_3(2QAE)
DLDH_TRYCR
[Raw transfer]




FAD_A_3(1LPF)
DLDH_PSEFL
[Raw transfer]




FAD_A_4(1EBD)
DLDH1_GEOSE
[Raw transfer]




FAD_A_3(3LAD)
DLDH_AZOVI
[Raw transfer]




FAD_A_3(2QAE)
DLDH_TRYCR
[Raw transfer]




FAD_A_3(2EQ6)
?
[Raw transfer]




FAD_B_4(2EQ6)
?
[Raw transfer]




FAD_B_4(1LPF)
DLDH_PSEFL
[Raw transfer]




FAD_B_5(1V59)
DLDH_YEAST
[Raw transfer]




FAD_B_5(3II4)
DLDH_MYCTU
[Raw transfer]




FAD_A_3(3LAD)
DLDH_AZOVI
[Raw transfer]




FAD_A_4(1V59)
DLDH_YEAST
[Raw transfer]




FAD_C_3(1LVL)
DLDH1_PSEPU
[Raw transfer]




FAD_C_3(1LVL)
DLDH1_PSEPU
[Raw transfer]




3II_A_4(3II4)
DLDH_MYCTU
[Raw transfer]




3II_B_6(3II4)
DLDH_MYCTU
[Raw transfer]




107 HHSearch 92.6441% -78 - C3 -1EBD 12.2 DLDH1_GEOSE
23 PsiBlast_CBE 89.6240% -77 - C3 -1EBD 12.3 DLDH1_GEOSE
3 PsiBlast_PDB 88.8440% -77 - C3 -1EBD - DLDH1_GEOSE -
104 HHSearch 85.0441% -29 - C3 -2EQ6 13.1 ?
74 PsiBlast_CBE 84.8641% -31 - C3 -2EQ9 - ? -
76 PsiBlast_CBE 84.7641% -33 - C3 -2EQ9 - ? -
71 PsiBlast_CBE 84.6541% -30 - C3 -2EQ9 - ? -
75 PsiBlast_CBE 84.5541% -31 - C3 -2EQ9 - ? -
78 PsiBlast_CBE 84.4041% -33 - C3 -2EQ8 - ? -
70 PsiBlast_CBE 84.3741% -29 - C3 -2EQ9 - ? -
69 PsiBlast_CBE 84.1241% -32 - C3 -2EQ9 - ? -
2 PsiBlast_PDB 84.0644% -17 - C3 -2YQU - ? -
20 PsiBlast_PDB 83.8941% -30 - C3 -2EQ8 - ? -
19 PsiBlast_PDB 83.8841% -31 - C3 -2EQ6 13.1 ?
72 PsiBlast_CBE 83.8141% -30 - C3 -2EQ9 - ? -
12 PsiBlast_PDB 83.4841% -19 - C3 -4M52 - DLDH_MYCTU -
80 PsiBlast_CBE 83.3641% -31 - C3 -2EQ6 13.0 ?
79 PsiBlast_CBE 83.2341% -31 - C3 -2EQ8 - ? -
21 PsiBlast_CBE 83.2044% -16 - C3 -2YQU 12.1 ?
77 PsiBlast_CBE 83.0841% -30 - C3 -2EQ8 - ? -
22 PsiBlast_CBE 81.8644% -17 - C3 -2EQ7 13.0 ?
13 PsiBlast_PDB 81.4341% -17 - C3 -2A8X 12.2 DLDH_MYCTU
63 PsiBlast_CBE 81.0241% -17 - C3 -3II4 12.4 DLDH_MYCTU
11 PsiBlast_PDB 80.6541% -15 - C3 -3II4 12.4 DLDH_MYCTU
106 HHSearch 80.6242% -17 - C3 -2A8X 12.2 DLDH_MYCTU
97 HHSearch 80.1344% 5 - C3 -3URH 12.5 ?
93 HHSearch 77.1137% -11 - C3 -1LVL 11.2 DLDH1_PSEPU
95 HHSearch 76.8943% 14 * C3 *2QAE 12.2 DLDH_TRYCR
102 HHSearch 75.6640% 23 - C3 -1V59 12.7 DLDH_YEAST
18 PsiBlast_PDB 74.8040% 20 - C3 -1V59 12.8 DLDH_YEAST
90 PsiBlast_CBE 74.7336% -5 - C3 -1OJT 11.2 ?
67 PsiBlast_CBE 74.5840% 19 - C3 -1V59 12.7 DLDH_YEAST
17 PsiBlast_PDB 74.5440% 16 - C3 -1JEH 12.5 DLDH_YEAST
91 PsiBlast_CBE 74.1536% -5 - C3 -1BHY 11.1 ?
14 PsiBlast_PDB 73.6737% 8 - C3 -1LPF 12.5 DLDH_PSEFL
64 PsiBlast_CBE 73.6537% 7 - C3 -1LPF 11.9 DLDH_PSEFL
99 HHSearch 73.6236% 5 - C3 -1OJT 10.7 ?
100 HHSearch 73.4237% 6 - C3 -3LAD 11.8 DLDH_AZOVI
68 PsiBlast_CBE 72.3940% 25 - C3 -1JEH 13.5 DLDH_YEAST
65 PsiBlast_CBE 72.2540% 13 - C3 -2QAE 10.6 DLDH_TRYCR
66 PsiBlast_CBE 71.0737% 11 - C3 -3LAD 12.6 DLDH_AZOVI
15 PsiBlast_PDB 70.5140% 12 - C3 -2QAE 10.9 DLDH_TRYCR
114 Fugue 70.2738% 1 - C3 -1EBD 12.4 DLDH1_GEOSE
16 PsiBlast_PDB 69.8337% 12 - C3 -3LAD 11.7 DLDH_AZOVI
89 PsiBlast_CBE 68.3535% 5 - C3 -1LVL 10.5 DLDH1_PSEPU