@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu24120: (2016-07-08 )
MSWIVNKQSSQEELAGRFRKLMSAPDILQIPGAHDGMAALLAKEAGFSAIYLSGAAYTASRGLPDLGIITSAEIAERAKDLVRAADLPLLVDIDTGFGGVLNAARTAREMLEARVAAVQMEDQQLPKKCGHLNGKQLVPIKEMAQKIKAIKQAAPSLIVVARTDARAQEGLDAAIKRSEAYIEAGADAIFPEALQAENEFRQFAERIPVPLLANMTEFGKTPYYRADEFEDMGFHMVIYPVTSLRAAAKACERMFGLMKEHGSQKEGLHDMQTRKELYDTISYYDYEALDKTIAKTVLPDE

Atome Classification :

(27 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ICT_B_9(1XG4)
PRPB_ECOLI
[Raw transfer]




ICT_D_10(1XG4)
PRPB_ECOLI
[Raw transfer]




ICT_A_8(1XG4)
PRPB_ECOLI
[Raw transfer]




ICT_A_8(1XG4)
PRPB_ECOLI
[Raw transfer]




OAF_A_2(3M0J)
?
[Raw transfer]




SIN_B_12(1XG3)
PRPB_ECOLI
[Raw transfer]




SIN_D_15(1XG3)
PRPB_ECOLI
[Raw transfer]




SIN_A_10(1XG3)
PRPB_ECOLI
[Raw transfer]




PYR_A_3(4IQD)
?
[Raw transfer]




PYR_A_3(4IQD)
?
[Raw transfer]




PYR_D_12(1O5Q)
PRPB_SALTY
[Raw transfer]




PYR_A_9(1O5Q)
PRPB_SALTY
[Raw transfer]




PYR_C_11(1O5Q)
PRPB_SALTY
[Raw transfer]




PYR_B_10(1O5Q)
PRPB_SALTY
[Raw transfer]




GAQ_B_6(1ZLP)
PDP_DIACA
[Raw transfer]




PYR_C_13(1XG3)
PRPB_ECOLI
[Raw transfer]




GAQ_A_5(1ZLP)
PDP_DIACA
[Raw transfer]




GAQ_A_5(1ZLP)
PDP_DIACA
[Raw transfer]




GAQ_A_5(1ZLP)
PDP_DIACA
[Raw transfer]




98 HHSearch 99.0774%-105 - C4 -4IQD 3.4 ?
1 PsiBlast_PDB 98.2071%-105 - C4 -4IQD 3.4 ?
2 PsiBlast_PDB 95.3071%-103 - C4 -4IQE - ? -
109 HHSearch 76.1344% -43 - C4 -3EOO - ? -
9 PsiBlast_PDB 75.5045% -41 - C4 -3EOO - ? -
21 PsiBlast_CBE 70.8644% -12 - C4 -1MUM - PRPB_ECOLI -
103 HHSearch 70.4343% -15 - C4 -1XG4 3.7 PRPB_ECOLI
8 PsiBlast_PDB 69.8343% -12 - C4 -1O5Q 2.8 PRPB_SALTY
3 PsiBlast_PDB 69.7844% -12 - C4 -1MUM - PRPB_ECOLI -
24 PsiBlast_CBE 69.7744% -11 - C4 -1XG4 3.8 PRPB_ECOLI
25 PsiBlast_CBE 69.3044% -11 - C4 -1XG3 3.8 PRPB_ECOLI
29 PsiBlast_CBE 69.2443% -16 - C4 -1O5Q 4.3 PRPB_SALTY
27 PsiBlast_CBE 69.1044% -10 - C4 -1XG3 2.8 PRPB_ECOLI
28 PsiBlast_CBE 68.9443% -17 - C4 -1O5Q 2.7 PRPB_SALTY
6 PsiBlast_PDB 68.8544% -14 - C4 -1XG4 3.7 PRPB_ECOLI
4 PsiBlast_PDB 68.6744% -8 - C4 -1OQF - PRPB_ECOLI -
63 PsiBlast_CBE 68.6532% -47 - C4 -3B8I - OADC_PSEAE -
65 PsiBlast_CBE 68.6232% -50 - C4 -3B8I - OADC_PSEAE -
30 PsiBlast_CBE 68.4143% -14 - C4 -1O5Q 4.2 PRPB_SALTY
22 PsiBlast_CBE 68.2444% -11 - C4 -1XG4 3.6 PRPB_ECOLI
5 PsiBlast_PDB 68.0044% -10 - C4 -1XG3 2.2 PRPB_ECOLI
26 PsiBlast_CBE 66.9244% -9 - C4 -1XG3 4.3 PRPB_ECOLI
85 Fugue 66.2337% 8 - C4 -1ZLP 2.0 PDP_DIACA
95 HHSearch 65.6136% 9 - C4 -1ZLP 2.0 PDP_DIACA
31 PsiBlast_CBE 60.6339% 10 - C4 -1ZLP 1.9 PDP_DIACA
14 PsiBlast_PDB 59.6833% 9 - C4 -3M0J 2.7 ?
10 PsiBlast_PDB 59.2339% 16 - C4 -1ZLP 2.0 PDP_DIACA