@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu24140: (2016-07-08 )
MEEKQHYSPGLDGVIAAETHISYLDTQSSQILIRGYDLIELSETKSYLELVHLLLEGRLPEESEMETLERKINSASSLPADHLRLLELLPEDTHPMDGLRTGLSALAGYDRQIDDRSPSANKERAYQLLGKMPALTAASYRIINKKEPILPLQTLSYSANFLYMMTGKLPSSLEEQIFDRSLVLYSEHEMPNSTFAARVIASTHSDLYGALTGAVASLKGNLHGGANEAVMYLLLEAKTTSDFEQLLQTKLKRKEKIMGFGHRVYMKKMDPRALMMKEALQQLCDKAGDHRLYEMCEAGERLMEKEKGLYPNLDYYAAPVYWMLGIPIPLYTPIFFSARTSGLCAHVIEQHANNRLFRPRVSYMGPRYQTKS

Atome Classification :

(27 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

COA_D_4(1AJ8)
CISY_PYRFU
[Raw transfer]



COA_C_3(1AJ8)
CISY_PYRFU
[Raw transfer]



COA_C_3(1AJ8)
CISY_PYRFU
[Raw transfer]



COA_C_3(1AJ8)
CISY_PYRFU
[Raw transfer]



COA_C_3(1A59)
PRPC_ABDS2
[Raw transfer]



COA_C_3(1A59)
PRPC_ABDS2
[Raw transfer]



CIT_E_5(1A59)
PRPC_ABDS2
[Raw transfer]



CIT_F_6(1AJ8)
CISY_PYRFU
[Raw transfer]



GOL_D_4(1VGM)
?
[Raw transfer]



GOL_D_4(1VGM)
?
[Raw transfer]



GOL_A_4(1IOM)
?
[Raw transfer]



GOL_A_4(1IOM)
?
[Raw transfer]



FLC_A_3(2P2W)
?
[Raw transfer]



FLC_A_3(2P2W)
?
[Raw transfer]
26 PsiBlast_CBE 95.3537%-100 - C10 -3HWK - PRPC_MYCTU -
71 HHSearch 95.2938% -95 - C10 -3HWK - PRPC_MYCTU -
22 PsiBlast_CBE 95.1737% -98 - C10 -3HWK - PRPC_MYCTU -
23 PsiBlast_CBE 94.8137% -99 - C10 -3HWK - PRPC_MYCTU -
1 PsiBlast_PDB 94.4137% -94 - C10 -3HWK - PRPC_MYCTU -
25 PsiBlast_CBE 94.3637%-100 - C10 -3HWK - PRPC_MYCTU -
27 PsiBlast_CBE 93.7237% -99 - C10 -3HWK - PRPC_MYCTU -
21 PsiBlast_CBE 93.7237% -99 - C10 -3HWK - PRPC_MYCTU -
24 PsiBlast_CBE 93.6837% -97 - C10 -3HWK - PRPC_MYCTU -
72 HHSearch 92.3939%-114 - C10 -2P2W 3.8 ?
2 PsiBlast_PDB 92.1340% -78 - C10 -1IOM 3.1 ?
67 HHSearch 91.9239% -82 - C10 -1IOM 3.1 ?
3 PsiBlast_PDB 91.4840% -82 - C10 -1IXE - ? -
11 PsiBlast_PDB 91.3738%-112 - C10 -2P2W 3.8 ?
29 PsiBlast_CBE 90.5340% -81 - C10 -1IXE - ? -
30 PsiBlast_CBE 90.5240% -79 - C10 -1IXE - ? -
28 PsiBlast_CBE 89.4540% -78 - C10 -1IXE - ? -
8 PsiBlast_PDB 88.6335% -85 - C10 -1VGP - ? -
74 HHSearch 88.5935% -85 - C10 -1VGP - ? -
31 PsiBlast_CBE 88.2738% -47 - C10 -1AJ8 7.9 CISY_PYRFU
80 HHSearch 86.9036% -65 - C10 -1VGM 2.3 ?
88 Fugue 86.7038% -48 * C10 *1AJ8 7.1 CISY_PYRFU
4 PsiBlast_PDB 85.8538% -44 - C10 -1AJ8 7.1 CISY_PYRFU
66 HHSearch 85.6338% -47 - C10 -1AJ8 7.1 CISY_PYRFU
76 HHSearch 85.1738% -40 - C10 -1A59 7.5 PRPC_ABDS2
12 PsiBlast_PDB 84.8736% -51 - C10 -1VGM 2.3 ?
6 PsiBlast_PDB 82.3339% -41 - C10 -1A59 7.4 PRPC_ABDS2