@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu24150: (2016-07-08 )
MHVTQEQVMMRKMVRDFARKEIAPAAEIMEKTDEFPFQLIKKMGKHGLMGIPVPEQYGGAGADVVSYILAIHEISRISAAVGVILSVHTSVGTNPILYFGNEEQKMKYIPNLASGDHLGAFALTEPHSGSDAGSLRTTAIKKNGKYLLNGSKIFITNGGAADIYITFALTAPDQGRHGISAFIVEKNTPGFTVGKKERKLGLYGSNTTELIFDNAEVPEANLLGKEGDGFHIAMANLNVGRIGIAAQALGIAEAALEHAVDYAKQRVQFGRPIAANQGISFKLADMATRAEAARHLVYHAADLHNRGLNCGKEASMAKQFASDAAVKAALDAVQIYGGYGYMKDYPVERLLRDAKVTQIYEGTNEIQRLIISKYLLGGT

Atome Classification :

(38 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FAD_A_3(2D29)
?
[Raw transfer]




FAD_A_9(3MDE)
ACADM_PIG
[Raw transfer]




FAD_A_3(3NF4)
?
[Raw transfer]




FAD_A_3(2D29)
?
[Raw transfer]




FAD_B_11(3MDE)
ACADM_PIG
[Raw transfer]




FAD_E_5(1SIQ)
GCDH_HUMAN
[Raw transfer]




CAA_B_7(1BUC)
ACDS_MEGEL
[Raw transfer]




FAD_B_4(2D29)
?
[Raw transfer]




FAD_B_7(3MDD)
ACADM_PIG
[Raw transfer]




CAA_G_7(1JQI)
ACADS_RAT
[Raw transfer]




FAD_C_3(2DVL)
?
[Raw transfer]




FAD_A_4(1UKW)
?
[Raw transfer]




CAA_E_5(1JQI)
ACADS_RAT
[Raw transfer]




FAD_B_5(1UKW)
?
[Raw transfer]




FAD_D_4(2DVL)
?
[Raw transfer]




FAD_A_5(3MDD)
ACADM_PIG
[Raw transfer]




FAD_B_7(2PG0)
?
[Raw transfer]




CAA_A_5(1BUC)
ACDS_MEGEL
[Raw transfer]




COS_A_4(4L1F)
?
[Raw transfer]




COS_B_9(4L1F)
?
[Raw transfer]




FAD_A_5(2PG0)
?
[Raw transfer]




FAD_A_5(2PG0)
?
[Raw transfer]




FDA_B_15(4N5F)
?
[Raw transfer]




1 PsiBlast_PDB 91.7455% -76 - C2 -4L1F - ? -
108 HHSearch 91.7255% -75 - C2 -4L1F 6.9 ?
27 PsiBlast_CBE 90.8950% -84 - C2 -4M9A - ? -
2 PsiBlast_PDB 90.8850% -84 - C2 -4N5F - ? -
21 PsiBlast_CBE 90.1255% -76 - C2 -4L1F 6.5 ?
4 PsiBlast_PDB 87.6250% -83 - C2 -4M9A - ? -
43 PsiBlast_CBE 87.5041% -82 - C2 -2JIF - ACDSB_HUMAN -
26 PsiBlast_CBE 87.3650% -80 - C2 -4M9A - ? -
44 PsiBlast_CBE 87.2741% -80 - C2 -2JIF - ACDSB_HUMAN -
110 HHSearch 87.2641% -83 - C2 -2JIF - ACDSB_HUMAN -
23 PsiBlast_CBE 87.2549% -87 - C2 -4U83 - ? -
117 HHSearch 87.1650% -89 - C2 -4U83 - ? -
10 PsiBlast_PDB 87.1047% -83 - C2 -2DVL 8.9 ?
3 PsiBlast_PDB 87.0149% -89 - C2 -4U83 - ? -
45 PsiBlast_CBE 86.5541% -81 - C2 -2JIF - ACDSB_HUMAN -
41 PsiBlast_CBE 86.5547% -84 - C2 -2DVL 9.6 ?
25 PsiBlast_CBE 86.5249% -88 - C2 -4U83 - ? -
11 PsiBlast_PDB 86.4941% -81 - C2 -2JIF - ACDSB_HUMAN -
22 PsiBlast_CBE 85.8650% -90 - C2 -4N5F 7.9 ?
118 HHSearch 85.7248% -81 * C2 *2VIG - ACADS_HUMAN -
7 PsiBlast_PDB 85.4149% -74 - C2 -1JQI 7.6 ACADS_RAT
32 PsiBlast_CBE 85.2649% -76 - C2 -1JQI 7.4 ACADS_RAT
105 HHSearch 83.3443% -87 - C2 -3NF4 8.1 ?
113 HHSearch 80.3947% -40 - C2 -2D29 9.0 ?
52 PsiBlast_CBE 79.9348% -41 - C2 -2D29 9.3 ?
16 PsiBlast_PDB 77.8448% -39 - C2 -2D29 9.0 ?
28 PsiBlast_CBE 77.6951% -4 - C2 -1BUC 6.7 ACDS_MEGEL
9 PsiBlast_PDB 77.5743% -36 - C2 -1UKW 9.0 ?
5 PsiBlast_PDB 77.2951% -8 - C2 -1BUC 6.6 ACDS_MEGEL
40 PsiBlast_CBE 76.3443% -35 - C2 -1UKW 9.3 ?
60 PsiBlast_CBE 75.7539% -34 - C2 -3MDE 7.1 ACADM_PIG
59 PsiBlast_CBE 75.4239% -33 - C2 -3MDE 8.8 ACADM_PIG
61 PsiBlast_CBE 75.0239% -31 - C2 -3MDD 7.9 ACADM_PIG
20 PsiBlast_PDB 74.7539% -34 - C2 -3MDD 7.7 ACADM_PIG
93 PsiBlast_CBE 74.2138% -37 - C2 -2PG0 9.2 ?
92 PsiBlast_CBE 73.3438% -38 - C2 -2PG0 8.5 ?
116 HHSearch 73.1838% -35 - C2 -2PG0 9.2 ?
119 HHSearch 71.2334% -38 - C2 -1SIQ 8.2 GCDH_HUMAN