@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu24170: (2016-07-08 )
MRKTVIVSAARTPFGKFGGVLKEVKAAELGGIVMKEALQQAGVSGDDVEGNVMGMVVQAGSGQIPSRQAARLAGMPWSVPSETLNKVCASGLRAVTLCDQMIRAQDADILVAGGMESMSNIPYAVPAGRWGARMGDGELRDLMVYDGLTCAFDEVHMAVHGNTAAKEYAISRREQDEWALRSHARAAKAADEGKFQDEIVPVNWIGRKGKPNVVDKDEAIRRDTSLDQLAKLAPIYASDGSITAGNAPGVNDGAGAFVLMSEEKAAELGKRPLATILGFSTTGMPAHELAAAPGFAINKLLKKNGLTVQDIDLFEVNEAFASVVLTCEKIVGFDLEKVNVNGGAIALGHPIGASGARILMTLVYELKRRGGGLGVAAICSGAAQGDAVLVQVH

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

COA_A_3(4XL4)
?
[Raw transfer]



COA_B_9(4XL4)
?
[Raw transfer]



PEG_A_5(4WYR)
THLA_CLOAB
[Raw transfer]



PEG_B_8(4WYR)
THLA_CLOAB
[Raw transfer]



GOL_B_7(4XL3)
?
[Raw transfer]



GOL_B_14(4XL2)
THLA_CLOAB
[Raw transfer]



GOL_A_8(4XL2)
THLA_CLOAB
[Raw transfer]



GOL_A_6(4XL3)
?
[Raw transfer]
119 HHSearch 88.9549% -85 - C5 -4O9A - THIL_CUPNH -
8 PsiBlast_PDB 88.9148% -83 - C5 -4O9C - THIL_CUPNH -
32 PsiBlast_CBE 88.8948% -83 - C5 -4O9C - THIL_CUPNH -
31 PsiBlast_CBE 88.8649% -85 - C5 -4O99 - THIL_CUPNH -
30 PsiBlast_CBE 88.7649% -86 - C5 -4O99 - THIL_CUPNH -
7 PsiBlast_PDB 88.6849% -86 - C5 -4O99 - THIL_CUPNH -
33 PsiBlast_CBE 88.4248% -82 - C5 -4O9C - THIL_CUPNH -
9 PsiBlast_PDB 88.0449% -85 - C5 -4O9A - THIL_CUPNH -
2 PsiBlast_PDB 87.7749% -79 - C5 -4WYR 2.5 THLA_CLOAB
109 HHSearch 87.4846% -84 * C5 *2VU1 - THIL_ZOORA -
24 PsiBlast_CBE 87.2749% -78 - C5 -4WYR 2.3 THLA_CLOAB
3 PsiBlast_PDB 86.6948% -75 - C5 -4N45 - ? -
1 PsiBlast_PDB 86.5549% -77 - C5 -4N44 - ? -
11 PsiBlast_PDB 86.4846% -85 - C5 -1DLV - THIL_ZOORA -
25 PsiBlast_CBE 86.3648% -79 - C5 -4XL4 6.4 ?
4 PsiBlast_PDB 86.2248% -77 - C5 -4XL3 2.8 ?
103 HHSearch 86.0943% -83 - C5 -3SS6 - ? -
15 PsiBlast_PDB 85.9946% -82 - C5 -1M1T - THIL_ZOORA -
22 PsiBlast_CBE 85.9849% -79 - C5 -4XL2 3.1 THLA_CLOAB
5 PsiBlast_PDB 85.9448% -78 - C5 -4XL4 6.5 ?
26 PsiBlast_CBE 85.7548% -75 - C5 -4XL3 2.2 ?
21 PsiBlast_CBE 85.7049% -80 - C5 -4XL2 2.2 THLA_CLOAB