@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu24310: (2016-07-08 )
MTATIIDGKETAREKREQLAKEVEELKKQGVTPGLAVILIGDDPASHSYVRGKKKAAETMGMNFKLDQFDSSLTEAELLSIIDQYNQDPEFHGILVQLPLPDHISEKAVIERISPDKDVDGFHPLNVGKMLLGEDTFLPCTPHGIVELLKKTNIDLSGKEVVVVGRSNIVGKPVGQLLLNENATVTYCHSRTENITEHTKKADILVVAVGRANFISADQIKEGAVVIDVGVNRLENGKLCGDVEFEGAKEKASFITPVPGGVGPMTITMLAHNTVKSAKRTLS

Atome Classification :

(34 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

L34_B_9(4B4V)
?
[Raw transfer]




9L9_A_6(4B4W)
?
[Raw transfer]




9L9_B_9(4B4W)
?
[Raw transfer]




9L9_B_7(4CJX)
?
[Raw transfer]




NAP_A_3(3NGL)
FOLD_THEAC
[Raw transfer]




NDP_C_3(1A4I)
C1TC_HUMAN
[Raw transfer]




NAP_C_3(1DIB)
C1TC_HUMAN
[Raw transfer]




NDP_C_3(1A4I)
C1TC_HUMAN
[Raw transfer]




L37_A_6(1DIG)
C1TC_HUMAN
[Raw transfer]




NDP_D_4(1A4I)
C1TC_HUMAN
[Raw transfer]




NAP_A_4(1DIG)
C1TC_HUMAN
[Raw transfer]




L34_E_5(1DIB)
C1TC_HUMAN
[Raw transfer]




NAD_A_3(3P2O)
FOLD_CAMJE
[Raw transfer]




NAD_A_3(3P2O)
FOLD_CAMJE
[Raw transfer]




NAP_D_4(1DIB)
C1TC_HUMAN
[Raw transfer]




L24_A_5(1DIA)
C1TC_HUMAN
[Raw transfer]




NAP_A_3(1DIA)
C1TC_HUMAN
[Raw transfer]




NAP_C_4(3NGL)
FOLD_THEAC
[Raw transfer]




NAP_B_5(1DIG)
C1TC_HUMAN
[Raw transfer]




NAP_B_4(1DIA)
C1TC_HUMAN
[Raw transfer]




EDO_B_14(4B4U)
?
[Raw transfer]




NAP_A_6(4CJX)
?
[Raw transfer]




NAP_A_6(4CJX)
?
[Raw transfer]




EDO_A_7(4B4U)
?
[Raw transfer]




NAP_B_7(4B4W)
?
[Raw transfer]




IMD_A_4(3L07)
FOLD_FRATT
[Raw transfer]




NAP_A_3(4B4V)
?
[Raw transfer]




NAP_B_10(4B4U)
?
[Raw transfer]




NAP_B_7(4B4V)
?
[Raw transfer]




NAP_A_3(4B4U)
?
[Raw transfer]




NAP_A_3(4B4U)
?
[Raw transfer]




NAP_A_3(4B4W)
?
[Raw transfer]




IMD_A_4(3L07)
FOLD_FRATT
[Raw transfer]




IMD_B_7(3L07)
FOLD_FRATT
[Raw transfer]




46 HHSearch 87.2751% -57 * C4 *3P2O 6.7 FOLD_CAMJE
1 PsiBlast_PDB 86.8650% -57 - C4 -3P2O 6.7 FOLD_CAMJE
3 PsiBlast_PDB 84.1251% -25 - C4 -1B0A - FOLD_ECOLI -
49 HHSearch 84.0752% -4 - C4 -3L07 3.8 FOLD_FRATT
51 HHSearch 83.8851% -24 - C4 -1B0A - FOLD_ECOLI -
21 PsiBlast_CBE 83.7453% -8 - C4 -3L07 3.7 FOLD_FRATT
2 PsiBlast_PDB 83.4053% -5 - C4 -3L07 3.8 FOLD_FRATT
12 PsiBlast_PDB 83.2745% -67 - C4 -2C2X - FOLD_MYCTU -
33 Fugue 82.9851% 2 - C4 -1B0A - FOLD_ECOLI -
45 HHSearch 82.7046% -66 - C4 -2C2X - FOLD_MYCTU -
11 PsiBlast_PDB 82.6946% 22 - C4 -1A4I 9.2 C1TC_HUMAN
6 PsiBlast_PDB 82.6048% -15 - C4 -4B4V 6.0 ?
24 PsiBlast_CBE 82.4248% -12 - C4 -4B4U 5.9 ?
44 HHSearch 82.1949% -19 - C4 -4A5O - FOLD_PSEAE -
10 PsiBlast_PDB 82.1046% 20 - C4 -1DIG 7.1 C1TC_HUMAN
8 PsiBlast_PDB 82.0246% 20 - C4 -1DIA 4.3 C1TC_HUMAN
23 PsiBlast_CBE 81.9848% -9 - C4 -4B4V 5.6 ?
13 PsiBlast_PDB 81.9345% -62 - C4 -2C2Y - FOLD_MYCTU -
4 PsiBlast_PDB 81.9349% -19 - C4 -4A5O - FOLD_PSEAE -
7 PsiBlast_PDB 81.9048% -15 - C4 -4B4W 5.8 ?
5 PsiBlast_PDB 81.8148% -13 - C4 -4B4U 6.1 ?
50 HHSearch 81.6347% 23 - C4 -1A4I 9.2 C1TC_HUMAN
9 PsiBlast_PDB 81.5646% 20 - C4 -1DIB 8.2 C1TC_HUMAN
28 PsiBlast_CBE 81.4346% 23 - C4 -1A4I 8.2 C1TC_HUMAN
43 HHSearch 81.4148% -14 - C4 -4B4U 6.1 ?
22 PsiBlast_CBE 81.3548% -9 - C4 -4B4W 5.8 ?
26 PsiBlast_CBE 80.9746% 21 - C4 -1DIB 4.5 C1TC_HUMAN
30 PsiBlast_CBE 80.9039% -20 - C4 -4CJX 6.1 ?
15 PsiBlast_PDB 80.2139% -15 - C4 -4CJX 7.6 ?
27 PsiBlast_CBE 80.1546% 21 - C4 -1DIA 8.4 C1TC_HUMAN
25 PsiBlast_CBE 80.0646% 21 - C4 -1DIG 7.2 C1TC_HUMAN
47 HHSearch 78.5441% 6 - C4 -4CJX 7.1 ?
16 PsiBlast_PDB 77.2437% -40 - C4 -3NGL 8.1 FOLD_THEAC
31 PsiBlast_CBE 74.7037% -39 - C4 -3NGL 8.5 FOLD_THEAC