@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu24850: (2016-07-09 )
MDEIWFAGIDLGGTTIKLAFINQYGEIQHKWEVPTDKTGDTITVTIAKTIDSKLDELQKPKHIIKYIGMGAPGPVDMAAGVVYETVNLGWKNYALKNHLETETGIPAVIENDANIAALGEMWKGAGDGAKDVILVTLGTGVGGGIIANGEIVHGINGAGGEIGHICSIPEGGAPCNCGKTGCIETIASATGIVRIAKEKIANAKKTTRLKATEQLSARDVFEAAGENDEIALEVVDYVAKHLGLVLGNLASSLNPSKIVLGGGVSRAGELLRSKVEKTFRKCAFPRAAQAADISIAALGNDAGVIGGAWIAKNEWLKHQNC

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

BGC_A_2(3VGM)
?
[Raw transfer]



BGC_A_3(1SZ2)
GLK_ECO57
[Raw transfer]



FRU_A_2(3LM9)
SCRK_BACSU
[Raw transfer]



GOL_A_3(2HOE)
?
[Raw transfer]



GOL_A_6(1XC3)
SCRK_BACSU
[Raw transfer]



ANP_A_5(3VGL)
?
[Raw transfer]



ANP_A_5(3VGL)
?
[Raw transfer]



SUC_A_3(2GUP)
?
[Raw transfer]
34 HHSearch 78.8446% 21 - C1 -2QM1 - ? -
1 PsiBlast_PDB 74.6946% 22 - C1 -2QM1 - ? -
25 PsiBlast_CBE 74.4735% -48 - C1 -3VGK - ? -
41 HHSearch 73.7135% -34 - C1 -3VGL 2.3 ?
23 PsiBlast_CBE 73.4935% -47 - C1 -3VGK - ? -
4 PsiBlast_PDB 73.1835% -43 - C1 -3VGM 3.4 ?
2 PsiBlast_PDB 72.7535% -48 - C1 -3VGK - ? -
27 PsiBlast_CBE 72.5435% -52 - C1 -3VGK - ? -
36 HHSearch 72.5026% -42 - C1 -1Z05 - ? -
24 PsiBlast_CBE 72.3535% -48 - C1 -3VGK - ? -
22 PsiBlast_CBE 72.2935% -48 - C1 -3VGK - ? -
21 PsiBlast_CBE 71.6035% -42 - C1 -3VGK - ? -
3 PsiBlast_PDB 70.9435% -35 - C1 -3VGL 2.3 ?
5 PsiBlast_PDB 70.2729%-119 - C1 -1Z05 - ? -
26 PsiBlast_CBE 70.2535% -44 - C1 -3VGK - ? -
40 HHSearch 69.2130% -49 * C1 *2AA4 - NANK_ECOLI -
59 Fugue 68.4625% 2 - C1 -1Z05 - ? -
35 HHSearch 67.5526% -19 - C1 -1Z6R - MLC_ECOLI -
44 HHSearch 65.9030% -31 - C1 -4DB3 - NAGK_VIBVU -
29 PsiBlast_CBE 65.8131% -73 - C1 -3VOV - ? -
16 PsiBlast_PDB 30.8731% -13 - C1 -3LM9 3.2 SCRK_BACSU