@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu24950: (2016-07-09 )
MSIATEAVMKQEVYQVNGMNLWYGQHHALKNINLSIYENEVTAIIGPSGCGKSTFIKTLNLMIQMTPNVKLAGELNYNGSNILKDKVDIVDLRKNIGMVFQKGNPFPQSIFDNVAYGPRVHGTKNKKKLQEIVEKSLKDVALWDEVKDRLHTSALSLSGGQQQRLCIARALATNPDILLMDEPTSALDPISTRKIEELILELKDKYTIVIVTHNMQQAARVSDQTAFFYMGELVECDNTNKMFSNPKDQRTLDYISGKFG

Atome Classification :

(47 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_J_5(4YMU)
?
[Raw transfer]




ATP_A_5(1B0U)
HISP_SALTY
[Raw transfer]




ATP_B_3(4FWI)
?
[Raw transfer]




ANP_J_5(3C41)
?
[Raw transfer]




ANP_B_7(2ONJ)
Y1866_STAAM
[Raw transfer]




ATP_J_5(4YMV)
?
[Raw transfer]




AGS_B_6(3C4J)
?
[Raw transfer]




ATP_A_7(4YMU)
?
[Raw transfer]




ADP_B_6(2Q0H)
?
[Raw transfer]




ANP_K_6(3C41)
?
[Raw transfer]




ANP_A_8(2ONJ)
Y1866_STAAM
[Raw transfer]




ATP_A_6(4YMV)
?
[Raw transfer]




AGS_A_4(3C4J)
?
[Raw transfer]




ATP_A_5(1L2T)
Y796_METJA
[Raw transfer]




ATP_A_5(1B0U)
HISP_SALTY
[Raw transfer]




ADP_A_5(2Q0H)
?
[Raw transfer]




ADP_A_5(2OLJ)
?
[Raw transfer]




ADP_B_6(2OLJ)
?
[Raw transfer]




ATP_B_6(3FVQ)
FBPC_NEIG1
[Raw transfer]




ATP_B_6(1L2T)
Y796_METJA
[Raw transfer]




ATP_A_3(3FVQ)
FBPC_NEIG1
[Raw transfer]




AT4_B_6(2OLK)
?
[Raw transfer]




ATP_D_5(3VX4)
?
[Raw transfer]




ADP_A_3(3TIF)
Y796_METJA
[Raw transfer]




ADP_B_6(2HYD)
Y1866_STAAM
[Raw transfer]




AT4_D_8(2OLK)
?
[Raw transfer]




ADP_A_5(2HYD)
Y1866_STAAM
[Raw transfer]




ADP_A_2(4U00)
?
[Raw transfer]




128_A_2(2PMK)

[Raw transfer]




ACP_A_4(4AYT)
ABCBA_HUMAN
[Raw transfer]




ATP_A_3(3VX4)
?
[Raw transfer]




ADP_B_2(2FF7)

[Raw transfer]




ADP_B_8(3TIF)
Y796_METJA
[Raw transfer]




AT4_C_7(2OLK)
?
[Raw transfer]




AT4_A_5(2OLK)
?
[Raw transfer]




ACP_A_4(4AYX)
ABCBA_HUMAN
[Raw transfer]




ANP_A_2(4AYW)
ABCBA_HUMAN
[Raw transfer]




132 HHSearch 86.3235% 0 - C- -4FWI - ? -
2 PsiBlast_PDB 81.7136% -22 - C1 -4U02 - ? -
23 PsiBlast_CBE 81.3136% -19 - C1 -4U02 - ? -
21 PsiBlast_CBE 81.3136% -17 - C1 -4U02 - ? -
22 PsiBlast_CBE 80.5736% -21 - C1 -4U02 - ? -
4 PsiBlast_PDB 80.4738% -54 - C1 -4YMT - ? -
1 PsiBlast_PDB 80.3936% -16 * C1 *4U00 6.1 ?
10 PsiBlast_PDB 79.9338% -32 - C1 -2OUK - ? -
7 PsiBlast_PDB 79.7538% -55 - C1 -4YMW - ? -
34 PsiBlast_CBE 79.5338% -27 - C1 -2OLJ 5.6 ?
6 PsiBlast_PDB 78.8338% -54 - C1 -4YMV 5.2 ?
29 PsiBlast_CBE 78.3238% -36 - C1 -2OUK - ? -
25 PsiBlast_CBE 77.9938% -54 - C1 -4YMU 5.6 ?
26 PsiBlast_CBE 77.9338% -26 - C1 -3C4J 4.9 ?
5 PsiBlast_PDB 77.8738% -55 - C1 -4YMU 5.8 ?
3 PsiBlast_PDB 77.8738% -54 - C1 -4YMS - ? -
8 PsiBlast_PDB 77.7238% -35 - C1 -2OLJ 6.0 ?
31 PsiBlast_CBE 77.0338% -34 - C1 -2OLK 5.9 ?
9 PsiBlast_PDB 76.9538% -35 - C1 -2OLK 6.3 ?
13 PsiBlast_PDB 76.7738% -32 - C1 -3C41 6.7 ?
11 PsiBlast_PDB 76.2538% -34 - C1 -2Q0H 5.4 ?
35 PsiBlast_CBE 76.1038% -29 - C1 -3C41 5.7 ?
12 PsiBlast_PDB 75.9038% -34 - C1 -3C4J 6.6 ?
33 PsiBlast_CBE 75.8638% -35 - C1 -2OLK 6.1 ?
32 PsiBlast_CBE 75.5338% -34 - C1 -2OLK 6.4 ?
24 PsiBlast_CBE 75.4438% -53 - C1 -4YMV 4.8 ?
44 PsiBlast_CBE 73.6033% -2 - C1 -1B0U 5.9 HISP_SALTY
27 PsiBlast_CBE 69.9638% -36 - C1 -2Q0H 5.7 ?
106 Fugue 65.7733% 23 - C1 -1B0U 5.7 HISP_SALTY
51 PsiBlast_CBE 57.3332% -38 - C1 -4AYW 3.0 ABCBA_HUMAN
52 PsiBlast_CBE 57.1332% -39 - C1 -4AYX 3.1 ABCBA_HUMAN
87 PsiBlast_CBE 57.0831% -35 - C1 -3FVQ 5.5 FBPC_NEIG1
53 PsiBlast_CBE 56.0732% -35 - C1 -4AYT 3.3 ABCBA_HUMAN
88 PsiBlast_CBE 55.1231% -39 - C1 -3FVQ 4.6 FBPC_NEIG1
50 PsiBlast_CBE 54.0935% 5 - C1 -4FWI 5.0 ?
93 PsiBlast_CBE 53.5831% -69 - C1 -2PMK 4.7
49 PsiBlast_CBE 53.3836% -15 - C1 -3TIF 4.2 Y796_METJA
94 PsiBlast_CBE 51.7531% -66 - C1 -2FF7 4.3
47 PsiBlast_CBE 49.5536% -8 - C1 -1L2T 4.8 Y796_METJA
46 PsiBlast_CBE 48.8236% -9 - C1 -1L2T 4.8 Y796_METJA
91 PsiBlast_CBE 47.8832% 22 - C1 -2HYD 4.2 Y1866_STAAM
92 PsiBlast_CBE 47.7232% 21 - C1 -2HYD 4.3 Y1866_STAAM
90 PsiBlast_CBE 47.0232% 22 - C1 -2ONJ 5.6 Y1866_STAAM
48 PsiBlast_CBE 46.3936% -16 - C1 -3TIF 4.5 Y796_METJA
89 PsiBlast_CBE 46.3232% 22 - C1 -2ONJ 5.8 Y1866_STAAM
96 PsiBlast_CBE 38.0631% -35 - C1 -3VX4 5.0 ?
97 PsiBlast_CBE 38.0531% -36 - C1 -3VX4 4.8 ?