@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu24960: (2016-07-09 )
MSEQMVKEKPERAVIVPKQNHVLEVKDLSIYYGNKQAVHHVNMDIEKNAVTALIGPSGCGKSTFLRNINRMNDLIPSARAEGEILYEGLNILGGNINVVSLRREIGMVFQKPNPFPKSIYANITHALKYAGERNKAVLDEIVEESLTKAALWDEVKDRLHSSALSLSGGQQQRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITGLKREYSIIIVTHNMQQALRVSDRTAFFLNGELVEYGQTEQIFTSPKKQKTEDYINGKFG

Atome Classification :

(35 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

AGS_B_6(3C4J)
?
[Raw transfer]




ATP_A_5(1B0U)
HISP_SALTY
[Raw transfer]




ATP_A_5(1L2T)
Y796_METJA
[Raw transfer]




AGS_A_4(3C4J)
?
[Raw transfer]




ATP_B_6(1L2T)
Y796_METJA
[Raw transfer]




ACP_A_4(4AYT)
ABCBA_HUMAN
[Raw transfer]




AT4_C_7(2OLK)
?
[Raw transfer]




ADP_B_6(2Q0H)
?
[Raw transfer]




ADP_A_5(2Q0H)
?
[Raw transfer]




ADP_A_5(2OLJ)
?
[Raw transfer]




ADP_B_6(2OLJ)
?
[Raw transfer]




ATP_C_3(1VCI)
?
[Raw transfer]




AT4_A_5(2OLK)
?
[Raw transfer]




ADP_A_3(3TIF)
Y796_METJA
[Raw transfer]




AT4_D_8(2OLK)
?
[Raw transfer]




AT4_B_6(2OLK)
?
[Raw transfer]




ANP_A_2(4AYW)
ABCBA_HUMAN
[Raw transfer]




ADP_B_8(3TIF)
Y796_METJA
[Raw transfer]




9 PsiBlast_PDB 86.2438% -49 - C1 -4YMU - ? -
44 PsiBlast_CBE 85.9135% 0 - C- -4FWI - ? -
11 PsiBlast_PDB 84.4138% -50 - C1 -4YMW - ? -
31 PsiBlast_CBE 84.3838% -49 - C1 -4YMV - ? -
32 PsiBlast_CBE 84.1638% -49 - C1 -4YMU - ? -
30 PsiBlast_CBE 83.9937% -23 - C1 -3C41 - ? -
8 PsiBlast_PDB 83.3938% -47 - C1 -4YMT - ? -
7 PsiBlast_PDB 83.2638% -48 - C1 -4YMS - ? -
6 PsiBlast_PDB 82.1837% -18 - C1 -3C41 - ? -
10 PsiBlast_PDB 82.0638% -48 - C1 -4YMV - ? -
12 PsiBlast_PDB 81.4933% -54 - C1 -4U00 - ? -
34 PsiBlast_CBE 79.4833% -56 - C1 -4U02 - ? -
13 PsiBlast_PDB 78.9433% -51 - C1 -4U02 - ? -
35 PsiBlast_CBE 78.2533% -51 - C1 -4U02 - ? -
33 PsiBlast_CBE 77.7633% -52 - C1 -4U02 - ? -
105 Fugue 77.5132% 6 - C1 -3TUZ - METN_ECOLI -
1 PsiBlast_PDB 74.0837% 16 - C1 -2OLJ 6.7 ?
3 PsiBlast_PDB 73.5437% 12 - C1 -2OUK - ? -
21 PsiBlast_CBE 72.9137% 22 - C1 -3C4J 6.5 ?
2 PsiBlast_PDB 72.5337% 12 - C1 -2OLK 4.6 ?
5 PsiBlast_PDB 72.5137% 23 - C1 -3C4J 6.7 ?
27 PsiBlast_CBE 72.3437% 16 - C1 -2OLK 5.6 ?
26 PsiBlast_CBE 72.2937% 22 - C1 -2OLK 6.2 ?
29 PsiBlast_CBE 72.1737% 28 - C1 -2OLJ 5.9 ?
28 PsiBlast_CBE 71.9137% 18 - C1 -2OLK 4.5 ?
4 PsiBlast_PDB 70.4737% 19 - C1 -2Q0H 5.6 ?
22 PsiBlast_CBE 69.7637% 18 - C1 -2Q0H 5.7 ?
43 PsiBlast_CBE 62.5032% -38 - C1 -1VCI 3.7 ?
107 Fugue 61.8435% 25 - C1 -1B0U 6.0 HISP_SALTY
90 PsiBlast_CBE 55.4034% -4 - C1 -3TIF 4.6 Y796_METJA
91 PsiBlast_CBE 54.5934% -4 - C1 -3TIF 4.4 Y796_METJA
88 PsiBlast_CBE 52.3234% 11 - C1 -1L2T 4.9 Y796_METJA
89 PsiBlast_CBE 52.1534% 11 - C1 -1L2T 4.5 Y796_METJA
69 PsiBlast_CBE 46.0131% 22 - C1 -4AYT 5.9 ABCBA_HUMAN
67 PsiBlast_CBE 44.6331% 29 - C1 -4AYW 5.5 ABCBA_HUMAN