@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu25250: (2016-07-10 )
MSTIELNKRQEHILQIVKENGPITGEHIAEKLNLTRATLRPDLAILTMSGFLEARPRVGYFYTGKTGTQLLADKLKKLQVKDFQSIPVVIHENVSVYDAICTMFLEDVGTLFVVDRDAVLVGVLSRKDLLRASIGQQELTSVPVHIIMTRMPNITVCRREDYVMDIAKHLIEKQIDALPVIKDTDKGFEVIGRVTKTNMTKILVSLSENEIL

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_B_7(3FWS)
CCPN_BACSU
[Raw transfer]




ADP_A_3(3FWR)
CCPN_BACSU
[Raw transfer]




ANP_A_3(3FWS)
CCPN_BACSU
[Raw transfer]




ADP_B_4(3FWR)
CCPN_BACSU
[Raw transfer]




2 PsiBlast_PDB 92.04100%-192 - C1 -3FWR 5.3 CCPN_BACSU
3 PsiBlast_PDB 92.02100%-182 - C1 -3FWS 5.8 CCPN_BACSU
21 PsiBlast_CBE 91.01100%-172 - C1 -3FWS 6.7 CCPN_BACSU
1 PsiBlast_PDB 90.89100%-174 - C1 -3FV6 - CCPN_BACSU -
22 PsiBlast_CBE 90.62100%-176 - C1 -3FWR 5.3 CCPN_BACSU
6 PsiBlast_PDB 56.3027%-107 - C1 -3KPD - Y100_METJA -
5 PsiBlast_PDB 55.9027%-108 - C1 -3KPB - Y100_METJA -
4 PsiBlast_PDB 55.5827%-101 - C1 -3KPC - -
33 HHSearch 54.4527%-104 - C1 -3KPB - Y100_METJA -
8 PsiBlast_PDB 52.6025% -39 - C1 -1PVM - ? -
7 PsiBlast_PDB 52.0525% -37 - C1 -2QH1 - ? -
36 HHSearch 51.9523%-123 - C1 -2O16 - ? -
32 HHSearch 51.7722%-108 - C1 -2YZI - ? -
30 PsiBlast_CBE 51.2931%-215 - C1 -4GQY - CBSX2_ARATH -
59 Fugue 50.9120% -69 - C1 -2UV4 - -
35 HHSearch 50.7325% -51 - C1 -1PVM - ? -
14 PsiBlast_PDB 50.1733%-206 - C1 -4GQW - -
10 PsiBlast_PDB 49.8422%-180 - C1 -3KH5 - Y1225_METJA -
11 PsiBlast_PDB 49.7722%-187 - C1 -3LFZ - Y1225_METJA -
45 HHSearch 49.5623% -85 - C1 -1PBJ - ? -