@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu25780: (2016-07-10 )
MENKIIYFLCTGNSCRSQMAEGWAKQYLGDEWKVYSAGIEAHGLNPNAVKAMKEVGIDISNQTSDIIDSDILNNADLVVTLCGDAADKCPMTPPHVKREHWGFDDPARAQGTEEEKWAFFQRVRDEIGNRLKEFAETGK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

TRS_D_4(1JF8)
ARSC_STAAU
[Raw transfer]




TRS_D_4(1JF8)
ARSC_STAAU
[Raw transfer]




TRS_D_4(1JF8)
ARSC_STAAU
[Raw transfer]




43 HHSearch 79.15100% -95 - C6 -1JL3 - ARSC_BACSU -
33 Fugue 79.15100% -95 - C6 -1JL3 - ARSC_BACSU -
1 PsiBlast_PDB 79.03100% -95 - C6 -1JL3 - ARSC_BACSU -
23 PsiBlast_CBE 78.88100%-107 - C6 -1JL3 - ARSC_BACSU -
2 PsiBlast_PDB 75.66100% -80 - C6 -1Z2D - ARSC_BACSU -
3 PsiBlast_PDB 75.28100% -67 - C6 -1Z2E - ARSC_BACSU -
4 PsiBlast_PDB 73.8597% -47 - C6 -2IPA - ARSC_BACSU -
21 PsiBlast_CBE 72.78100%-109 - C6 -1JL3 - ARSC_BACSU -
22 PsiBlast_CBE 71.36100%-117 - C6 -1JL3 - ARSC_BACSU -
45 HHSearch 66.5765% -96 - C6 -1JF8 3.3 ARSC_STAAU
34 Fugue 65.9863% -93 - C6 -1JF8 3.3 ARSC_STAAU
5 PsiBlast_PDB 65.1565% -98 - C6 -2CD7 - ARSC_STAAU -
11 PsiBlast_PDB 64.8162% -83 - C6 -1RXI - ARSC_STAAU -
6 PsiBlast_PDB 64.7864%-110 - C6 -1LJL - ARSC_STAAU -
8 PsiBlast_PDB 64.7263% -98 - C6 -1JF8 3.3 ARSC_STAAU
7 PsiBlast_PDB 64.6264%-107 - C6 -1LK0 - ARSC_STAAU -
9 PsiBlast_PDB 64.5863% -93 - C6 -2FXI - ARSC_STAAU -
24 PsiBlast_CBE 64.2164%-108 - C6 -1LK0 - ARSC_STAAU -
10 PsiBlast_PDB 63.9962% -87 - C6 -1RXE - ARSC_STAAU -
12 PsiBlast_PDB 63.5461% -85 - C6 -1JFV - ARSC_STAAU -