@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu27080: (2016-07-12 )
MRRIDKIYHQLKHNFHDSTLDHLLKIQGNSAKEIAEQLKMERSNVSFELNNLVRSKKVIKIKTFPVRYIPVEIAEKLFNKKWDTEMMEVKDLQAFSGNSKQNHQHISTNPLELMIGAKGSLKKAISQAKAAVFYPPNGLHMLLLGPTGSGKSLFANRIYQFAIYSDILKAGAPFITFNCADYYNNPQLLLSQLFGHKKGSFTGAAEDKAGLVEQANGGILFMDEIHRLPPEGQEMLFYFIDSGSYNRLGESEHKRTSNVLFICATTENPSSALLKTFLRRIPMTIHIPSLEERSLNERVDLTTFLLGKEAERIKKNLSVHIDVYNALIHSAKFGNVGQLKSNVQLVCAHGFLHNLDRNEVIELTVRDLPDEIKQEWMSSSKNMQRSKAISEYVNITTIISPIVEDETTKIDEDLSFNLYHLIEEKVKTLMKEGLSKKDINQYILTDVHLHVRSFFHHQAFQKDNLLTFVEDDVIQMTKQLKEIAEHELDCTFDRKFIYFLSMHIDAFLKRGKQIDVLNTQETDEIRDTHVKEYRVAMIFKDKIQEYFKVAIPEIEVIYLTMLIHSIKSLKENKRVGIIVAAHGNSTASSMVEVATELLGSTPIAAVDMPLTVSPSDILECVAEKMKQVDEGEGVLMLVDMGSLAMLESRLEEKTGISIKTISNVTTSMVLDAVRKVNYLNLNLHAIYQSVTKDFIELWERQPAASGKKKALVSICTTGSGTAKKLEDILTTIVNKASDTPIHILTVSSIKLANSIKEIEKEYEILATVGTKDPKINAPHVSLEVLIEGEGEKLIQQAITKGSISLSNGLNEANIIVRELCEDSLKKYLVFLNPHHVIDMLLEWLQTVQDELGVIFNNAVLIKVIMHTAFAFERVIKQNPIAFSEEEEINDQLKEMVYVTERTLAPYEEKLGLRISDDEKLFIAAIFAEEVHGQLF

Atome Classification :

(27 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_2(2C96)
PSPF_ECOLI
[Raw transfer]



ATP_A_2(4QNR)
PSPF_ECOLI
[Raw transfer]



ATP_A_3(2C9C)
PSPF_ECOLI
[Raw transfer]



ADP_A_8(1NY5)
?
[Raw transfer]



ANP_A_2(2C99)
PSPF_ECOLI
[Raw transfer]



ADP_A_2(5EXT)
?
[Raw transfer]



ADP_A_2(2C98)
PSPF_ECOLI
[Raw transfer]



ADP_A_3(3DZD)
?
[Raw transfer]



AMP_A_2(2VII)
PSPF_ECOLI
[Raw transfer]



ADP_B_4(4BS1)
?
[Raw transfer]



ADP_B_4(4BT0)
?
[Raw transfer]



ADP_B_4(4BT1)
?
[Raw transfer]
10 PsiBlast_PDB 77.4230% 0 - C- -1NY6 - ? -
44 HHSearch 74.5929% -66 - C1 -3DZD - ? -
36 Fugue 68.1522% 60 - C1 -1NY5 - ? -
31 Fugue 66.0824% -40 - C1 -1OJL - ZRAR_SALTY -
17 PsiBlast_PDB 65.1629% -57 - C1 -3M0E - ? -
42 HHSearch 63.7726% -64 * C1 *5EXP - ? -
9 PsiBlast_PDB 63.5830% -47 - C1 -1NY5 5.7 ?
38 HHSearch 62.8126% -55 - C1 -5EXX - ? -
1 PsiBlast_PDB 62.0537%-139 - C1 -2C96 5.6 PSPF_ECOLI
3 PsiBlast_PDB 61.9537%-118 - C1 -2C99 5.6 PSPF_ECOLI
48 HHSearch 61.7742%-184 - C1 -3GX1 - ? -
11 PsiBlast_PDB 61.4830% -54 - C1 -4LY6 - ? -
45 HHSearch 61.2025% -67 - C1 -4QHS - ? -
15 PsiBlast_PDB 61.0832% -99 - C1 -5EXS - ? -
8 PsiBlast_PDB 60.8830% -78 - C1 -1OJL - ZRAR_SALTY -
4 PsiBlast_PDB 60.7837%-116 - C1 -2C9C 5.0 PSPF_ECOLI
12 PsiBlast_PDB 60.5030% -58 - C1 -4LZZ - ? -
14 PsiBlast_PDB 60.4332%-101 - C1 -5EXP - ? -
6 PsiBlast_PDB 59.8836%-126 - C1 -4QNR 4.4 PSPF_ECOLI
13 PsiBlast_PDB 59.8132% -92 - C1 -5EXX - ? -
16 PsiBlast_PDB 57.8032% -99 - C1 -5EXT 5.4 ?
2 PsiBlast_PDB 57.6637%-112 - C1 -2C98 5.1 PSPF_ECOLI
5 PsiBlast_PDB 56.1637%-111 - C1 -2VII 3.7 PSPF_ECOLI
7 PsiBlast_PDB 55.0932% 10 - C1 -3DZD 5.1 ?
18 PsiBlast_PDB 46.2237%-118 - C1 -4BS1 5.5 ?
20 PsiBlast_PDB 45.5537%-118 - C1 -4BT1 5.4 ?
19 PsiBlast_PDB 45.4737%-118 - C1 -4BT0 5.2 ?