@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu27220: (2016-07-12 )
MNNLAFLFPGQGSQFVGMGKSFWNDFVLAKRLFEEASDAISMDVKKLCFDGDMTELTRTMNAQPAILTVSVIAYQVYMQEIGIKPHFLAGHSLGEYSALVCAGVLSFQEAVKLIRQRGILMQNADPEQLGTMAAITQVYIQPLQDLCTEISTEDFPVGVACMNSDQQHVISGHRQAVEFVIKKAERMGANHTYLNVSAPFHSSMMRSASEQFQTALNQYSFRDAEWPIISNVTAIPYNNGHSVREHLQTHMTMPVRWAESMHYLLLHGVTEVIEMGPKNVLVGLLKKITNHIAAYPLGQTSDLHLLSDSAERNENIVNLRKKQLNKMMIQSIIARNYNKDAKTYSNLTTPLFPQIQLLKERVERKEVELSAEELEHSIHLCQLICEAKQLPTWEQLRILK

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

COZ_B_2(2G2Z)
FABD_ECOLI
[Raw transfer]




GOL_B_2(2G1H)
FABD_ECOLI
[Raw transfer]




GOL_A_2(3K89)
?
[Raw transfer]




GLY_A_2(3TQE)
?
[Raw transfer]




GLY_A_2(3TQE)
?
[Raw transfer]




ACY_A_2(2QC3)
FABD_MYCTU
[Raw transfer]




NHE_A_2(3R97)
?
[Raw transfer]




ACY_A_3(1NM2)
?
[Raw transfer]




CXS_A_14(3HJV)
?
[Raw transfer]




45 HHSearch 90.9540% -85 - C1 -1MLA - FABD_ECOLI -
37 HHSearch 90.3133%-119 - C1 -3PTW - ? -
1 PsiBlast_PDB 89.6739% -79 - C1 -1MLA - FABD_ECOLI -
2 PsiBlast_PDB 88.4538% -80 - C1 -2G1H 3.1 FABD_ECOLI
4 PsiBlast_PDB 87.7838% -76 - C1 -2G2Y - FABD_ECOLI -
3 PsiBlast_PDB 87.6338% -80 - C1 -2G2O - FABD_ECOLI -
7 PsiBlast_PDB 87.0137% -91 - C- -3EZO - ? -
5 PsiBlast_PDB 86.3238% -77 - C1 -2G2Z 3.5 FABD_ECOLI
10 PsiBlast_PDB 86.2036% -79 - C1 -3H0P - FABD_SALTY -
46 HHSearch 85.9536% -86 - C- -3EZO - ? -
15 PsiBlast_PDB 85.6135% -73 - C1 -3TQE 3.2 ?
12 PsiBlast_PDB 85.0736% -73 - C1 -3K89 2.9 ?
40 HHSearch 84.4636% -35 - C1 -3QAT - ? -
13 PsiBlast_PDB 84.2136% -77 - C1 -3R97 2.4 ?
11 PsiBlast_PDB 83.1236% -76 - C1 -3IM8 - ? -
14 PsiBlast_PDB 82.8738%-116 - C1 -2CUY - ? -
50 HHSearch 82.7738% -80 - C1 -3SBM - ? -
8 PsiBlast_PDB 82.7038% -35 - C1 -3QAT - ? -
21 PsiBlast_CBE 81.6938% -35 - C1 -3QAT - ? -
47 HHSearch 80.8036% -63 - C1 -3IM9 - FABD_STAAM -
48 HHSearch 80.4636% -22 - C1 -3TQE 3.2 ?
16 PsiBlast_PDB 79.3334% -40 - C1 -3HJV 3.6 ?