@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu27250: (2016-07-12 )
MKKKTLMIHGGITGDEKTGAVSVPIYQVSTYKQPKAGQHTGYEYSRTANPTRTALEALVTELESGEAGYAFSSGMAAITAVMMLFNSGDHVVLTDDVYGGTYRVMTKVLNRLGIESTFVDTSSREEVEKAIRPNTKAIYIETPTNPLLKITDLTLMADIAKKAGVLLIVDNTFNTPYFQQPLTLGADIVLHSATKYLGGHSDVVGGLVVTASKELGEELHFVQNSTGGVLGPQDSWLLMRGIKTLGLRMEAIDQNARKIASFLENHPAVQTLYYPGSSNHPGHELAKTQGAGFGGMISFDIGSEERVDAFLGNLKLFTIAESLGAVESLISVPARMTHASIPRERRLELGITDGLIRISVGIEDAEDLLEDIGQALENI

Atome Classification :

(34 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PLG_A_2(4HF8)
?
[Raw transfer]




LCS_A_2(4OMA)
?
[Raw transfer]




PPJ_A_3(1E5E)
?
[Raw transfer]




PPJ_A_3(1E5E)
?
[Raw transfer]




PLP_B_8(1E5F)
?
[Raw transfer]




PPJ_B_7(1E5E)
?
[Raw transfer]




PLP_A_3(1E5F)
?
[Raw transfer]




PZP_A_2(3MKJ)
?
[Raw transfer]




PLP_B_5(5DX5)
?
[Raw transfer]




PLP_A_11(1IBJ)
METC_ARATH
[Raw transfer]




PLP_A_3(5DX5)
?
[Raw transfer]




PLP_A_11(1IBJ)
METC_ARATH
[Raw transfer]




PLP_A_3(5DX5)
?
[Raw transfer]




PLP_A_3(2CTZ)
?
[Raw transfer]




NLE_A_2(3JWB)
?
[Raw transfer]




PLP_C_13(1IBJ)
METC_ARATH
[Raw transfer]




MPJ_A_2(3JWA)
?
[Raw transfer]




EDO_A_22(1PFF)
?
[Raw transfer]




ECX_A_2(3JW9)
?
[Raw transfer]




EDO_A_23(1PFF)
?
[Raw transfer]




1 PsiBlast_PDB 91.9360%-101 - C1 -4L0O - METB_HELPY -
23 PsiBlast_CBE 91.9060% -99 - C1 -4L0O - METB_HELPY -
26 PsiBlast_CBE 90.8160%-101 - C1 -4L0O - METB_HELPY -
24 PsiBlast_CBE 90.1360%-102 - C1 -4L0O - METB_HELPY -
21 PsiBlast_CBE 88.9860% -98 - C1 -4L0O - METB_HELPY -
25 PsiBlast_CBE 88.9760%-102 - C1 -4L0O - METB_HELPY -
22 PsiBlast_CBE 88.7360%-102 - C1 -4L0O - METB_HELPY -
27 PsiBlast_CBE 87.3860%-100 - C1 -4L0O - METB_HELPY -
5 PsiBlast_PDB 80.9745%-104 - C1 -1IBJ 4.0 METC_ARATH
31 PsiBlast_CBE 80.5645%-100 - C1 -1IBJ 3.5 METC_ARATH
2 PsiBlast_PDB 79.4054% -20 - C1 -4IY7 - ? -
28 PsiBlast_CBE 79.2954% -17 - C1 -4IY7 - ? -
29 PsiBlast_CBE 79.1554% -17 - C1 -4IY7 - ? -
3 PsiBlast_PDB 78.3654% -20 - C1 -4IYO - ? -
117 HHSearch 78.3260% -7 - C1 -4L0O - METB_HELPY -
9 PsiBlast_PDB 77.9446% -2 - C1 -3JWA 2.6 ?
11 PsiBlast_PDB 77.6946% -1 - C1 -3JW9 3.1 ?
30 PsiBlast_CBE 77.5154% -18 - C1 -4IY7 - ? -
113 HHSearch 77.0753% -9 - C1 -4IY7 - ? -
6 PsiBlast_PDB 76.9346% -2 - C1 -4OMA 6.2 ?
10 PsiBlast_PDB 76.6346% 2 - C1 -3JWB 2.2 ?
7 PsiBlast_PDB 75.4346% -3 - C1 -4HF8 6.0 ?
40 PsiBlast_CBE 72.1344% 4 - C1 -1E5E 5.1 ?
116 HHSearch 71.6346% 5 - C1 -1E5E 5.7 ?
8 PsiBlast_PDB 71.6046% 15 - C1 -3MKJ 5.5 ?
37 PsiBlast_CBE 71.5546% 5 - C1 -5DX5 3.7 ?
115 HHSearch 71.0348% 7 - C1 -5DX5 3.2 ?
39 PsiBlast_CBE 70.9544% 4 - C1 -1E5F 3.9 ?
118 HHSearch 70.7844% -17 - C1 -1IBJ 4.0 METC_ARATH
38 PsiBlast_CBE 70.5144% 3 - C1 -1E5F 3.8 ?
20 PsiBlast_PDB 70.3244% 6 - C1 -1E5E 5.7 ?
19 PsiBlast_PDB 69.2946% 10 - C1 -5DX5 3.2 ?
71 PsiBlast_CBE 63.0744% -16 - C1 -1PFF 2.8 ?
127 HHSearch 57.8535% -2 - C1 -2CTZ 4.6 ?