@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu27430: (2016-07-13 )
MITFQNVNKHYGDFHVLKQINLQIEKGEVVVIIGPSGSGKSTLLRCINRLESINEGVLTVNGTAINDRKTDINQVRQNIGMVFQHFHLYPHKTVLQNIMLAPVKVLRQSPEQAKETARYYLEKVGIPDKADAYPSQLSGGQQQRVAIARGLAMKPEVMLFDEPTSALDPEMIGEVLDVMKTLAKEGMTMVVVTHEMGFAKEVADRIVFIDEGKILEEAVPAEFYANPKEERARLFLSRILNH

Atome Classification :

(39 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_J_5(4YMU)
?
[Raw transfer]




ATP_A_7(4YMU)
?
[Raw transfer]




ATP_A_6(4YMV)
?
[Raw transfer]




ATP_A_5(1B0U)
HISP_SALTY
[Raw transfer]




ANP_J_5(3C41)
?
[Raw transfer]




AGS_B_6(3C4J)
?
[Raw transfer]




ATP_A_5(1L2T)
Y796_METJA
[Raw transfer]




ANP_K_6(3C41)
?
[Raw transfer]




ATP_A_3(3FVQ)
FBPC_NEIG1
[Raw transfer]




ATP_J_5(4YMV)
?
[Raw transfer]




ATP_A_3(3FVQ)
FBPC_NEIG1
[Raw transfer]




ATP_B_6(1L2T)
Y796_METJA
[Raw transfer]




AGS_A_4(3C4J)
?
[Raw transfer]




ADP_A_5(2Q0H)
?
[Raw transfer]




ADP_A_3(3TIF)
Y796_METJA
[Raw transfer]




ADP_B_6(2Q0H)
?
[Raw transfer]




ATP_B_6(3FVQ)
FBPC_NEIG1
[Raw transfer]




ADP_A_2(4U00)
?
[Raw transfer]




ADP_B_8(3TIF)
Y796_METJA
[Raw transfer]




ADP_A_5(2OLJ)
?
[Raw transfer]




ADP_A_3(4YER)
?
[Raw transfer]




ADP_A_2(4U00)
?
[Raw transfer]




ADP_B_6(2OLJ)
?
[Raw transfer]




AT4_B_6(2OLK)
?
[Raw transfer]




AT4_D_8(2OLK)
?
[Raw transfer]




AT4_C_7(2OLK)
?
[Raw transfer]




AT4_A_5(2OLK)
?
[Raw transfer]




ATP_C_3(1VCI)
?
[Raw transfer]




LMT_A_7(4MKI)
ECFA2_CALS4
[Raw transfer]




LMT_B_4(4MKI)
ECFA2_CALS4
[Raw transfer]




24 PsiBlast_CBE 94.0562%-132 - C1 -4YMV 5.1 ?
7 PsiBlast_PDB 92.2262%-128 - C1 -4YMW - ? -
25 PsiBlast_CBE 91.9362%-136 - C1 -4YMU 6.0 ?
3 PsiBlast_PDB 91.5562%-132 - C1 -4YMS - ? -
5 PsiBlast_PDB 90.8562%-130 - C1 -4YMU 5.3 ?
32 PsiBlast_CBE 89.7458%-131 - C1 -2OLK 6.3 ?
34 PsiBlast_CBE 89.6858%-130 - C1 -2OLK 6.3 ?
23 PsiBlast_CBE 89.5760%-123 - C1 -4U02 - ? -
8 PsiBlast_PDB 89.5358%-139 - C1 -2OLJ 6.2 ?
22 PsiBlast_CBE 89.2160%-126 - C1 -4U02 - ? -
6 PsiBlast_PDB 88.9162%-134 - C1 -4YMV 5.4 ?
4 PsiBlast_PDB 88.7062%-131 - C1 -4YMT - ? -
1 PsiBlast_PDB 88.3260%-122 - C1 -4U00 6.1 ?
2 PsiBlast_PDB 88.0060%-120 - C1 -4U02 - ? -
21 PsiBlast_CBE 87.7460%-119 - C1 -4U02 - ? -
10 PsiBlast_PDB 87.6658%-135 - C1 -2OUK - ? -
120 HHSearch 87.0661%-119 - C1 -4U00 6.2 ?
12 PsiBlast_PDB 86.7258%-131 - C1 -3C4J 6.9 ?
28 PsiBlast_CBE 86.5058%-135 - C1 -2Q0H 6.4 ?
29 PsiBlast_CBE 86.1058%-128 - C1 -2OUK - ? -
9 PsiBlast_PDB 86.0558%-133 - C1 -2OLK 6.2 ?
13 PsiBlast_PDB 85.6658%-124 - C1 -3C41 6.7 ?
33 PsiBlast_CBE 85.4858%-133 - C1 -2OLK 6.2 ?
11 PsiBlast_PDB 85.4558%-130 - C1 -2Q0H 5.7 ?
26 PsiBlast_CBE 85.2058%-134 - C1 -3C4J 5.2 ?
27 PsiBlast_CBE 84.4858%-131 - C1 -3C41 6.1 ?
35 PsiBlast_CBE 83.6358%-129 - C1 -2OLJ 5.8 ?
14 PsiBlast_PDB 67.2954% -8 - C1 -1B0U 6.0 HISP_SALTY
81 PsiBlast_CBE 56.4237%-100 - C1 -3FVQ 7.6 FBPC_NEIG1
82 PsiBlast_CBE 55.3937%-104 - C1 -3FVQ 7.1 FBPC_NEIG1
109 HHSearch 53.7032%-121 - C1 -4YER 6.5 ?
106 HHSearch 52.7536%-119 - C1 -3FVQ 7.0 FBPC_NEIG1
70 PsiBlast_CBE 51.6340% 26 - C1 -1L2T 7.0 Y796_METJA
73 PsiBlast_CBE 51.2040% 28 - C1 -3TIF 6.1 Y796_METJA
71 PsiBlast_CBE 50.4540% 26 - C1 -1L2T 6.5 Y796_METJA
72 PsiBlast_CBE 50.1540% 27 - C1 -3TIF 6.2 Y796_METJA
77 PsiBlast_CBE 46.3439% -29 - C1 -4MKI 2.2 ECFA2_CALS4
44 PsiBlast_CBE 42.2936% -43 - C1 -1VCI 4.5 ?
78 PsiBlast_CBE 40.7039% -30 - C1 -4MKI 2.0 ECFA2_CALS4