@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu27510: (2016-07-13 )
MERIYLDHAATSPMDERVLEQMIPHFSGSFGNPSSIHSFGRESRKWVDEARAQIAAEIGAAEQEIIFTSGGTEADNLAIMGTALARKDLGRHIITTKIEHHAVLHTCEKLEGDGFDITYLDVDQNGRVSAKQVKEALRDDTILVTVMYGNNEVGTVQPIEEIGELLKEHKAYFHTDAVQAFGLLPIDVKNSHIDLLSVSGHKLNGPKGTGFLYASKDVKLSPLLFGGEQERKRRAGTENVPGIVGLKEAIKLSSEERDEKNEKYQSFKAIFADTLRDAGVAFEVNGDKEHSLPHVLNLYFPGVSVEALLVNLDMAGVAVSSGSACTAGSVLPSHVLTAMFGEESDRLTSSIRISFGLGNTAEQVKTAAKHVADVVKRLT

Atome Classification :

(27 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PMP_A_5(4R5F)
ISCS2_ARCFU
[Raw transfer]



PLP_A_3(3VAX)
?
[Raw transfer]



PLP_D_4(1ECX)
?
[Raw transfer]



PLP_A_3(3VAX)
?
[Raw transfer]



PLP_C_3(1ECX)
?
[Raw transfer]



PLP_C_3(1ECX)
?
[Raw transfer]



PLP_B_4(3VAX)
?
[Raw transfer]



PLP_B_6(3LVJ)
ISCS_ECO57
[Raw transfer]



PLP_A_6(1EG5)
?
[Raw transfer]



PLP_A_6(1EG5)
?
[Raw transfer]



PLP_A_3(3A9X)
SCLY_RAT
[Raw transfer]



PLP_B_7(3A9Z)
SCLY_RAT
[Raw transfer]



PLP_A_3(3A9Z)
SCLY_RAT
[Raw transfer]



PLP_B_5(1T3I)
CSD_SYNY3
[Raw transfer]



PLP_A_3(3LVK)
ISCS_ECO57
[Raw transfer]



PLP_A_3(3A9Z)
SCLY_RAT
[Raw transfer]



PLP_B_4(3A9X)
SCLY_RAT
[Raw transfer]



GOL_A_5(4LW2)
CSDA_ECOLI
[Raw transfer]



PLP_B_8(3A9Y)
SCLY_RAT
[Raw transfer]



GOL_G_7(1T3I)
CSD_SYNY3
[Raw transfer]



CYS_F_6(1ECX)
?
[Raw transfer]



CYS_E_5(1ECX)
?
[Raw transfer]
23 PsiBlast_CBE 75.5938% -84 - C2 -4EB5 - ISCS2_ARCFU -
3 PsiBlast_PDB 75.4939% -80 - C2 -4R5F 4.2 ISCS2_ARCFU
22 PsiBlast_CBE 75.0138% -83 - C2 -4EB7 - ISCS2_ARCFU -
4 PsiBlast_PDB 74.7438% -74 - C2 -4EB5 - ISCS2_ARCFU -
5 PsiBlast_PDB 74.6938% -75 - C2 -4EB7 - ISCS2_ARCFU -
64 HHSearch 74.5539% -81 - C2 -4HVK - ISCS2_ARCFU -
6 PsiBlast_PDB 74.2238% -80 - C2 -4HVK - ISCS2_ARCFU -
53 Fugue 70.4638% -20 - C2 -1ECX 3.7 ?
25 PsiBlast_CBE 70.1637% -16 - C2 -1ECX 3.9 ?
10 PsiBlast_PDB 69.6736% -18 - C2 -1EG5 3.6 ?
9 PsiBlast_PDB 69.6337% -20 - C2 -1ECX 3.9 ?
2 PsiBlast_PDB 68.8244% 25 - C2 -3LVK 3.5 ISCS_ECO57
21 PsiBlast_CBE 68.3244% 25 - C2 -3LVJ 3.9 ISCS_ECO57
54 Fugue 68.2839% 13 - C2 -4ISY - ISCSL_MYCTU -
1 PsiBlast_PDB 68.2444% 26 - C2 -3LVJ - ISCS_ECO57 -
70 HHSearch 67.5040% 13 * C2 *4ISY - ISCSL_MYCTU -
66 HHSearch 67.4137% -3 - C2 -1EG5 3.6 ?
7 PsiBlast_PDB 65.6341% 3 - C2 -3VAX 3.8 ?
24 PsiBlast_CBE 65.0641% 6 - C2 -3VAX 3.8 ?
69 HHSearch 64.4442% 4 - C2 -3VAX 3.8 ?
77 HHSearch 63.7034% 4 - C2 -3A9Z 4.0 SCLY_RAT
31 PsiBlast_CBE 60.8432% 13 - C2 -3A9X 3.7 SCLY_RAT
12 PsiBlast_PDB 60.8332% 10 - C2 -3A9Z 4.0 SCLY_RAT
11 PsiBlast_PDB 59.8232% 26 - C2 -3A9X 4.4 SCLY_RAT
29 PsiBlast_CBE 59.1332% 39 - C2 -3A9Z 3.9 SCLY_RAT
30 PsiBlast_CBE 58.7032% 38 - C2 -3A9Y 3.2 SCLY_RAT
32 PsiBlast_CBE 41.9531% -24 - C2 -1T3I 3.2 CSD_SYNY3