@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu27550: (2016-07-13 )
MFGRTYYCGDITEKAIGESVTLKGWVQKRRDLGGLIFIDLRDRTGIVQVVFNPDVSKEALAIAEGIRNEYVLDIQGKVVAREEGTVNPNLKTGAIEIHADGVNVLNAAKTPPFAISDQAEEVSEDVRLKHRYLDLRRPAMFQTMQLRHNVTKAVRSFLDENGFLDIETPILTGSTPEGARDYLVPSRVHEGEFYALPQSPQLFKQLLMVSGIERYYQIARCFRDEDLRADRQPEFTQIDIEMSFMSQEDIMSLAEEMMAKVMRETKGEELQLPLPRMTYDEAMNKYGSDKPDTRFDMLLTDVSDIVKDTEFKVFSSAVANGGVVKAINVKGGAGDYSRKDIDALGAFAANYGAKGLAWVKVEADGVKGPIAKFFDEEKQSKLIEALDAAEGDLLLFGADQFEVVAASLGALRLKLGKERGLIDEKLFNFLWVIDWPLLEHDPEEGRFYAAHHPFTMPVREDLELIETAPEDMKAQAYDLVLNGYELGGGSIRIFEKDIQEKMFALLGFSPEEAAEQFGFLLEAFEYGAPPHGGIALGLDRLVMLLAGRTNLRDTIAFPKTASASCLMTEAPGEVSDAQLDELHLSIKKKVKN

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

AMO_E_5(1C0A)
SYD_ECOLI
[Raw transfer]



AMO_F_6(1G51)
SYD_THETH
[Raw transfer]



AMO_E_5(1C0A)
SYD_ECOLI
[Raw transfer]



AMO_E_5(1C0A)
SYD_ECOLI
[Raw transfer]



AMO_E_5(1G51)
SYD_THETH
[Raw transfer]



ASP_A_3(4O2D)
SYDND_MYCS2
[Raw transfer]



ASP_B_6(4O2D)
SYDND_MYCS2
[Raw transfer]



AMO_A_3(3NEM)
SYD_THEKO
[Raw transfer]



ATP_B_4(3NEM)
SYD_THEKO
[Raw transfer]



ASP_A_3(4WJ4)
SYDND_PSEAE
[Raw transfer]



ASP_A_3(4WJ4)
SYDND_PSEAE
[Raw transfer]



ASP_A_3(3NEL)
SYD_THEKO
[Raw transfer]



3SY_A_2(4RMF)
SYDND_MYCS2
[Raw transfer]



3SY_A_2(4RMF)
SYDND_MYCS2
[Raw transfer]
9 PsiBlast_PDB 90.1546% -47 - C5 -4O2D 3.6 SYDND_MYCS2
2 PsiBlast_PDB 89.9152% -17 - C5 -1IL2 - SYD_ECOLI -
23 PsiBlast_CBE 89.7952% -18 - C5 -1EQR - SYD_ECOLI -
1 PsiBlast_PDB 89.7352% -14 - C5 -1EQR - SYD_ECOLI -
29 HHSearch 89.3847% -50 - C5 -4RMF 3.3 SYDND_MYCS2
3 PsiBlast_PDB 89.2852% -14 - C5 -1C0A 8.6 SYD_ECOLI
50 Fugue 89.2653% -15 - C5 -1C0A 8.6 SYD_ECOLI
21 PsiBlast_CBE 89.2652% -16 - C5 -1IL2 - SYD_ECOLI -
10 PsiBlast_PDB 89.0346% -48 - C5 -4RMF 3.3 SYDND_MYCS2
4 PsiBlast_PDB 88.9250% -20 - C5 -4WJ3 - SYDND_PSEAE -
30 HHSearch 88.5453% -15 - C5 -1C0A 8.6 SYD_ECOLI
22 PsiBlast_CBE 87.8952% -14 - C5 -1EQR - SYD_ECOLI -
5 PsiBlast_PDB 85.9650% -17 - C5 -4WJ4 2.7 SYDND_PSEAE
33 HHSearch 84.4551% -17 - C5 -4WJ4 2.7 SYDND_PSEAE
32 HHSearch 82.5653% 8 - C5 -1L0W - SYD_THETH -
8 PsiBlast_PDB 82.4051% 8 - C5 -1L0W - SYD_THETH -
24 PsiBlast_CBE 81.3651% 13 - C5 -1G51 7.8 SYD_THETH
7 PsiBlast_PDB 81.2351% 14 - C5 -1G51 7.5 SYD_THETH
25 PsiBlast_CBE 80.8646% -44 - C5 -4O2D 3.8 SYDND_MYCS2
6 PsiBlast_PDB 80.2251% 15 - C5 -1EFW - SYD_THETH -
26 PsiBlast_CBE 43.4737% -8 - C5 -3NEM 4.1 SYD_THEKO
13 PsiBlast_PDB 42.3037% -0 - C5 -3NEM 4.8 SYD_THEKO
12 PsiBlast_PDB 42.1237% 0 - C5 -3NEL 3.5 SYD_THEKO