@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu27730: (2016-07-13 )
MDERLVSSEADNHESVIEQSLRPQNLAQYIGQHKVKENLRVFIDAAKMRQETLDHVLLYGPPGLGKTTLASIVANEMGVELRTTSGPAIERPGDLAAILTALEPGDVLFIDEIHRLHRSIEEVLYPAMEDFCLDIVIGKGPSARSVRLDLPPFTLVGATTRVGLLTAPLRDRFGVMSRLEYYTQEELADIVTRTADVFEVEIDKPSALEIARRSRGTPRVANRLLRRVRDFAQVLGDSRITEDISQNALERLQVDRLGLDHIDHKLLMGMIEKFNGGPVGLDTISATIGEESHTIEDVYEPYLLQIGFIQRTPRGRIVTPAVYHHFQMEAPRYD

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADP_A_4(1IN7)
RUVB_THEMA
[Raw transfer]




ADP_A_5(1IN4)
RUVB_THEMA
[Raw transfer]




ADP_A_2(1IN8)
RUVB_THEMA
[Raw transfer]




ADP_A_5(1IN4)
RUVB_THEMA
[Raw transfer]




ADP_A_2(1IN5)
RUVB_THEMA
[Raw transfer]




ADP_A_4(1IN6)
RUVB_THEMA
[Raw transfer]




ADP_A_3(3PFI)
RUVB_CAMJE
[Raw transfer]




ATP_A_5(1J7K)
RUVB_THEMA
[Raw transfer]




ADP_A_3(3PFI)
RUVB_CAMJE
[Raw transfer]




ANP_C_3(1IXS)
RUVB_THET8
[Raw transfer]




ANP_M_13(1IXR)
RUVB_THET8
[Raw transfer]




ADE_B_6(1HQC)
RUVB_THET8
[Raw transfer]




ADE_A_5(1HQC)
RUVB_THET8
[Raw transfer]




ADE_A_5(1HQC)
RUVB_THET8
[Raw transfer]




ADE_A_5(1HQC)
RUVB_THET8
[Raw transfer]




4 PsiBlast_PDB 89.1756%-132 - C2 -1IN8 8.7 RUVB_THEMA
112 HHSearch 88.6357%-131 - C2 -1IN4 8.3 RUVB_THEMA
1 PsiBlast_PDB 88.5156%-130 - C2 -1IN4 8.3 RUVB_THEMA
3 PsiBlast_PDB 87.9956%-131 - C2 -1IN6 8.2 RUVB_THEMA
6 PsiBlast_PDB 87.5856%-132 - C2 -1J7K 8.5 RUVB_THEMA
2 PsiBlast_PDB 87.4356%-124 - C2 -1IN5 8.0 RUVB_THEMA
5 PsiBlast_PDB 86.6256%-132 - C2 -1IN7 8.7 RUVB_THEMA
110 HHSearch 84.4853%-118 - C2 -3PFI 8.2 RUVB_CAMJE
10 PsiBlast_PDB 84.3752%-121 - C2 -3PFI 8.2 RUVB_CAMJE
7 PsiBlast_PDB 78.6259% -22 - C2 -1IXS 6.0 RUVB_THET8
111 HHSearch 75.9059% -12 * C2 *1HQC 3.2 RUVB_THET8
8 PsiBlast_PDB 75.7459% -12 - C2 -1HQC 3.2 RUVB_THET8
130 Fugue 75.5859% -12 - C2 -1HQC 3.2 RUVB_THET8
21 PsiBlast_CBE 74.9759% -12 - C2 -1HQC 4.2 RUVB_THET8
9 PsiBlast_PDB 72.1559% -26 - C2 -1IXR 4.9 RUVB_THET8
117 HHSearch 42.6622% -27 - C2 -1NJG - DPO3X_ECOLI -
16 PsiBlast_PDB 42.4455%-175 - C4 -1R7R - TERA_MOUSE -
131 Fugue 40.7917% 1 - C2 -1IQP - RFCS_PYRFU -
115 HHSearch 39.2326% -31 - C2 -3PVS - RARA_ECOLI -
135 Fugue 38.7820% -7 - C2 -5C3C - ? -