@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu27860: (2016-07-13 )
MNHLQLKKLLNHFFLEDIGTGDLTSQSIFGEQSCEAEIVAKSEGIFAGAAIIKEGFSLLDENVQSILHKKDGDMLHKGEVIAELHGPAAALLSGERVVLNLIQRLSGIATMTREAVRCLDDEQIKICDTRKTTPGLRMLEKYAVRAGGGYNHRFGLYDGIMIKDNHIAACGSILEACKKARQAAGHMVNIEVEIETEEQLREAIAAGADVIMFDNCPPDTVRHFAKLTPANIKTEASGGITLESLPAFKGTGVNYISLGFLTHSVKSLDISMDVTLSNESVEECCYVNS

Atome Classification :

(45 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NCN_K_11(2B7Q)
NADC_HELPY
[Raw transfer]




NCN_A_3(4I9A)
?
[Raw transfer]




NCN_I_9(2B7Q)
NADC_HELPY
[Raw transfer]




NCN_B_4(4I9A)
?
[Raw transfer]




NCN_G_7(2B7Q)
NADC_HELPY
[Raw transfer]




NTM_O_15(2B7N)
NADC_HELPY
[Raw transfer]




NTM_M_13(2B7N)
NADC_HELPY
[Raw transfer]




NTM_M_13(2B7N)
NADC_HELPY
[Raw transfer]




NTM_Q_17(2B7N)
NADC_HELPY
[Raw transfer]




PHT_Q_17(2B7P)
NADC_HELPY
[Raw transfer]




PHT_O_15(2B7P)
NADC_HELPY
[Raw transfer]




PHT_M_13(2B7P)
NADC_HELPY
[Raw transfer]




PHT_B_4(3C2R)
NADC_YEAST
[Raw transfer]




NTM_B_4(1QAP)
NADC_SALTY
[Raw transfer]




NTM_A_3(1QAP)
NADC_SALTY
[Raw transfer]




NTM_A_2(3C2O)
NADC_YEAST
[Raw transfer]




NTM_A_3(1QAP)
NADC_SALTY
[Raw transfer]




NTM_A_3(1QAP)
NADC_SALTY
[Raw transfer]




PHT_A_3(3C2R)
NADC_YEAST
[Raw transfer]




PRP_A_2(3C2F)
NADC_YEAST
[Raw transfer]




PRP_A_2(3C2V)
NADC_YEAST
[Raw transfer]




EDO_C_9(3L0G)
?
[Raw transfer]




EDO_D_11(3L0G)
?
[Raw transfer]




EDO_B_7(3L0G)
?
[Raw transfer]




EDO_A_5(3L0G)
?
[Raw transfer]




EDO_A_5(3L0G)
?
[Raw transfer]




3 PsiBlast_PDB 91.2837%-137 - C7 -3TQV - ? -
81 PsiBlast_CBE 86.0736% -46 - C7 -2JBM - NADC_HUMAN -
96 HHSearch 85.5537% -76 - C7 -3TQV - ? -
76 PsiBlast_CBE 85.5436% -44 - C7 -2JBM - NADC_HUMAN -
82 PsiBlast_CBE 85.4036% -44 - C7 -2JBM - NADC_HUMAN -
78 PsiBlast_CBE 85.4036% -46 - C7 -2JBM - NADC_HUMAN -
73 PsiBlast_CBE 85.1536% -46 - C7 -5AYY - NADC_HUMAN -
60 PsiBlast_CBE 85.1336% -45 - C7 -5AYZ - NADC_HUMAN -
62 PsiBlast_CBE 84.9836% -42 - C7 -5AYZ - NADC_HUMAN -
69 PsiBlast_CBE 84.9736% -40 - C7 -5AYY - NADC_HUMAN -
17 PsiBlast_PDB 84.9636% -46 - C7 -5AYZ - NADC_HUMAN -
18 PsiBlast_PDB 84.9236% -44 - C7 -2JBM - NADC_HUMAN -
59 PsiBlast_CBE 84.8836% -42 - C7 -5AYZ - NADC_HUMAN -
61 PsiBlast_CBE 84.8636% -46 - C7 -5AYZ - NADC_HUMAN -
83 PsiBlast_CBE 84.7436% -44 - C7 -2JBM - NADC_HUMAN -
63 PsiBlast_CBE 84.5736% -44 - C7 -5AYZ - NADC_HUMAN -
97 HHSearch 84.5235% -82 - C7 -2B7N 3.5 NADC_HELPY
57 PsiBlast_CBE 84.4636% -47 - C7 -5AYZ - NADC_HUMAN -
56 PsiBlast_CBE 84.3836% -40 - C7 -5AYZ - NADC_HUMAN -
67 PsiBlast_CBE 84.3636% -46 - C7 -5AYY - NADC_HUMAN -
95 HHSearch 83.0941% -3 - C7 -1QAP 3.0 NADC_SALTY
113 Fugue 81.6340% 6 - C7 -1QAP 3.0 NADC_SALTY
22 PsiBlast_CBE 77.7735% 6 - C7 -3L0G 2.9 ?
23 PsiBlast_CBE 77.7535% 7 - C7 -3L0G 2.8 ?
94 HHSearch 77.5636% -9 - C7 -3L0G 2.7 ?
19 PsiBlast_PDB 77.5138% -39 - C7 -4I9A 4.2 ?
5 PsiBlast_PDB 77.3335% 10 - C7 -3L0G 2.7 ?
24 PsiBlast_CBE 77.0135% 10 - C7 -3L0G 2.9 ?
86 PsiBlast_CBE 76.9538% -33 - C7 -4I9A 5.0 ?
47 PsiBlast_CBE 76.8435% 2 - C7 -2B7P 3.9 NADC_HELPY
10 PsiBlast_PDB 76.6735% 3 - C7 -2B7N 3.5 NADC_HELPY
50 PsiBlast_CBE 75.8835% 4 - C7 -2B7N 3.7 NADC_HELPY
2 PsiBlast_PDB 75.6242% 3 - C7 -1QAP 3.0 NADC_SALTY
49 PsiBlast_CBE 75.1535% 2 - C7 -2B7N 3.4 NADC_HELPY
48 PsiBlast_CBE 75.0035% 4 - C7 -2B7P 3.7 NADC_HELPY
21 PsiBlast_CBE 75.0042% 6 - C7 -1QAP 3.5 NADC_SALTY
11 PsiBlast_PDB 74.6635% 3 - C7 -2B7P 3.7 NADC_HELPY
46 PsiBlast_CBE 74.3935% 9 - C7 -2B7Q 5.5 NADC_HELPY
45 PsiBlast_CBE 74.1535% 11 - C7 -2B7Q 4.1 NADC_HELPY
12 PsiBlast_PDB 73.2335% 2 - C7 -2B7Q 4.1 NADC_HELPY
87 PsiBlast_CBE 73.1133% -23 - C7 -3C2V 2.9 NADC_YEAST
91 PsiBlast_CBE 71.2833% -9 - C7 -3C2R 3.5 NADC_YEAST
89 PsiBlast_CBE 71.1233% -9 - C7 -3C2F 2.2 NADC_YEAST
88 PsiBlast_CBE 70.8133% -22 - C7 -3C2O 2.9 NADC_YEAST
90 PsiBlast_CBE 70.1233% -16 - C7 -3C2R 2.7 NADC_YEAST